Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm4974-201ENSMUST00000209974 875 ntBASIC17.24■□□□□ 0.35
Pfdn6Q03958 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.24■□□□□ 0.35
Pfdn6Q03958 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Gm37292-201ENSMUST00000192062 758 ntBASIC17.23■□□□□ 0.35
Pfdn6Q03958 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn6Q03958 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn6Q03958 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn6Q03958 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.21■□□□□ 0.35
Pfdn6Q03958 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn6Q03958 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pfdn6Q03958 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pfdn6Q03958 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Gm43183-201ENSMUST00000200632 547 ntBASIC17.2■□□□□ 0.34
Pfdn6Q03958 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.2■□□□□ 0.34
Pfdn6Q03958 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn6Q03958 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.19■□□□□ 0.34
Pfdn6Q03958 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms