Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
Xrn1P97789 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC24.53■■□□□ 1.52
Xrn1P97789 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC24.53■■□□□ 1.52
Xrn1P97789 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Xrn1P97789 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Xrn1P97789 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Xrn1P97789 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Xrn1P97789 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Xrn1P97789 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC24.52■■□□□ 1.52
Xrn1P97789 Gm18195-201ENSMUST00000207604 706 ntBASIC24.52■■□□□ 1.52
Xrn1P97789 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Xrn1P97789 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC24.52■■□□□ 1.52
Xrn1P97789 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Xrn1P97789 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Xrn1P97789 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Xrn1P97789 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Xrn1P97789 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Xrn1P97789 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Xrn1P97789 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC24.52■■□□□ 1.52
Xrn1P97789 Gm6296-201ENSMUST00000222599 943 ntBASIC24.52■■□□□ 1.52
Xrn1P97789 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC24.51■■□□□ 1.51
Xrn1P97789 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC24.51■■□□□ 1.51
Xrn1P97789 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Xrn1P97789 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC24.51■■□□□ 1.51
Xrn1P97789 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Xrn1P97789 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC24.5■■□□□ 1.51
Xrn1P97789 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
Xrn1P97789 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC24.5■■□□□ 1.51
Xrn1P97789 Gm12350-201ENSMUST00000121208 462 ntBASIC24.5■■□□□ 1.51
Xrn1P97789 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Xrn1P97789 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Xrn1P97789 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Xrn1P97789 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC24.5■■□□□ 1.51
Xrn1P97789 Gm37935-201ENSMUST00000192012 982 ntBASIC24.5■■□□□ 1.51
Xrn1P97789 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Xrn1P97789 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Xrn1P97789 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Xrn1P97789 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Xrn1P97789 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC24.5■■□□□ 1.51
Xrn1P97789 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC24.49■■□□□ 1.51
Xrn1P97789 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Xrn1P97789 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC24.49■■□□□ 1.51
Xrn1P97789 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Xrn1P97789 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Xrn1P97789 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Xrn1P97789 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC24.48■■□□□ 1.51
Xrn1P97789 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC24.48■■□□□ 1.51
Xrn1P97789 Gm13830-205ENSMUST00000201195 1155 ntBASIC24.48■■□□□ 1.51
Xrn1P97789 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Gm10060-201ENSMUST00000212002 111 ntBASIC24.48■■□□□ 1.51
Xrn1P97789 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 AC108846.1-201ENSMUST00000214531 513 ntBASIC24.48■■□□□ 1.51
Xrn1P97789 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC24.48■■□□□ 1.51
Xrn1P97789 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC24.48■■□□□ 1.51
Xrn1P97789 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Xrn1P97789 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Xrn1P97789 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Xrn1P97789 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Xrn1P97789 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Xrn1P97789 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Xrn1P97789 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Xrn1P97789 Gm13312-201ENSMUST00000119631 718 ntBASIC24.47■■□□□ 1.51
Xrn1P97789 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Xrn1P97789 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Xrn1P97789 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Xrn1P97789 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
Xrn1P97789 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Xrn1P97789 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC24.46■■□□□ 1.51
Xrn1P97789 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Xrn1P97789 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Xrn1P97789 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Xrn1P97789 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Xrn1P97789 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Xrn1P97789 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC24.45■■□□□ 1.51
Xrn1P97789 Gm5828-201ENSMUST00000071842 1860 ntBASIC24.45■■□□□ 1.5
Xrn1P97789 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms