Protein–RNA interactions for Protein: P53939

NIS1, Protein NIS1, yeastyeast

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIS1P53939 YOL013W-AYOL013W-A 192 nt0.45□□□□□ -2.34
NIS1P53939 YJL113WYJL113W 4647 nt0.35□□□□□ -2.35
NIS1P53939 tA(UGC)QtA(UGC)Q 76 nt0.29□□□□□ -2.36
NIS1P53939 snR161snR161 161 nt0.17□□□□□ -2.38
NIS1P53939 RPL41BYDL133C-A 78 nt-0.07□□□□□ -2.42
NIS1P53939 snR6snR6 112 nt-0.19□□□□□ -2.44
NIS1P53939 YOR335W-AYOR335W-A 81 nt-0.19□□□□□ -2.44
NIS1P53939 YHL009W-BYHL009W-B 5409 nt-0.31□□□□□ -2.46
NIS1P53939 CDC65tQ(CUG)M 72 nt-0.35□□□□□ -2.47
NIS1P53939 URB1YKL014C 5295 nt-0.37□□□□□ -2.47
NIS1P53939 tT(UGU)G1tT(UGU)G1 72 nt-0.38□□□□□ -2.47
NIS1P53939 tT(UGU)G2tT(UGU)G2 72 nt-0.38□□□□□ -2.47
NIS1P53939 tT(UGU)PtT(UGU)P 72 nt-0.38□□□□□ -2.47
NIS1P53939 tC(GCA)QtC(GCA)Q 76 nt-0.39□□□□□ -2.47
NIS1P53939 YMR315W-AYMR315W-A 108 nt-0.42□□□□□ -2.48
NIS1P53939 snR73snR73 106 nt-0.43□□□□□ -2.48
NIS1P53939 snR33snR33 183 nt-0.48□□□□□ -2.49
NIS1P53939 snR58snR58 96 nt-0.5□□□□□ -2.49
NIS1P53939 tP(UGG)QtP(UGG)Q 72 nt-0.57□□□□□ -2.5
NIS1P53939 YBR223W-AYBR223W-A 120 nt-0.6□□□□□ -2.51
NIS1P53939 YNR077CYNR077C 255 nt-0.61□□□□□ -2.51
NIS1P53939 YOR309CYOR309C 381 nt-0.7□□□□□ -2.52
NIS1P53939 tY(GUA)QtY(GUA)Q 84 nt-0.93□□□□□ -2.56
NIS1P53939 snR87snR87 109 nt-1.04□□□□□ -2.58
NIS1P53939 YBR126W-BYBR126W-B 144 nt-1.17□□□□□ -2.6
NIS1P53939 YDR543CYDR543C 300 nt-1.32□□□□□ -2.62
NIS1P53939 YOL166W-AYOL166W-A 156 nt-1.43□□□□□ -2.64
NIS1P53939 YJR162CYJR162C 351 nt-1.92□□□□□ -2.72
NIS1P53939 YJL136W-AYJL136W-A 84 nt-2.47□□□□□ -2.8
Retrieved 29 of 7,029 protein–RNA pairs in 66.1 ms