Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 YJL113WYJL113W 4647 nt0.41□□□□□ -2.34
CUZ1P53899 tA(UGC)QtA(UGC)Q 76 nt0.36□□□□□ -2.35
CUZ1P53899 YOL013W-AYOL013W-A 192 nt0.36□□□□□ -2.35
CUZ1P53899 snR161snR161 161 nt0.34□□□□□ -2.36
CUZ1P53899 RPL41BYDL133C-A 78 nt0.3□□□□□ -2.36
CUZ1P53899 YOR335W-AYOR335W-A 81 nt0.29□□□□□ -2.36
CUZ1P53899 snR6snR6 112 nt0.25□□□□□ -2.37
CUZ1P53899 tC(GCA)QtC(GCA)Q 76 nt0.23□□□□□ -2.37
CUZ1P53899 snR73snR73 106 nt0.07□□□□□ -2.4
CUZ1P53899 snR58snR58 96 nt0.04□□□□□ -2.4
CUZ1P53899 CDC65tQ(CUG)M 72 nt-0.05□□□□□ -2.42
CUZ1P53899 YMR315W-AYMR315W-A 108 nt-0.13□□□□□ -2.43
CUZ1P53899 URB1YKL014C 5295 nt-0.15□□□□□ -2.43
CUZ1P53899 YHL009W-BYHL009W-B 5409 nt-0.34□□□□□ -2.46
CUZ1P53899 tP(UGG)QtP(UGG)Q 72 nt-0.41□□□□□ -2.48
CUZ1P53899 YOR309CYOR309C 381 nt-0.41□□□□□ -2.48
CUZ1P53899 snR33snR33 183 nt-0.45□□□□□ -2.48
CUZ1P53899 snR87snR87 109 nt-0.53□□□□□ -2.49
CUZ1P53899 tT(UGU)G1tT(UGU)G1 72 nt-0.58□□□□□ -2.5
CUZ1P53899 tT(UGU)G2tT(UGU)G2 72 nt-0.58□□□□□ -2.5
CUZ1P53899 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
CUZ1P53899 YNR077CYNR077C 255 nt-0.73□□□□□ -2.53
CUZ1P53899 YBR223W-AYBR223W-A 120 nt-0.78□□□□□ -2.53
CUZ1P53899 tY(GUA)QtY(GUA)Q 84 nt-0.87□□□□□ -2.55
CUZ1P53899 YBR126W-BYBR126W-B 144 nt-1.65□□□□□ -2.67
CUZ1P53899 YOL166W-AYOL166W-A 156 nt-1.68□□□□□ -2.68
CUZ1P53899 YDR543CYDR543C 300 nt-1.76□□□□□ -2.69
CUZ1P53899 YJL136W-AYJL136W-A 84 nt-2.08□□□□□ -2.74
CUZ1P53899 YJR162CYJR162C 351 nt-2.65□□□□□ -2.83
Retrieved 29 of 7,029 protein–RNA pairs in 7.8 ms