Protein–RNA interactions for Protein: P53179

RIM8, pH-response regulator protein palF/RIM8, yeastyeast

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM8P53179 YOL013W-AYOL013W-A 192 nt0.29□□□□□ -2.36
RIM8P53179 tA(UGC)QtA(UGC)Q 76 nt0.21□□□□□ -2.38
RIM8P53179 snR161snR161 161 nt0.17□□□□□ -2.38
RIM8P53179 YOR335W-AYOR335W-A 81 nt0.04□□□□□ -2.4
RIM8P53179 snR6snR6 112 nt0.02□□□□□ -2.41
RIM8P53179 YJL113WYJL113W 4647 nt-0.03□□□□□ -2.41
RIM8P53179 RPL41BYDL133C-A 78 nt-0.04□□□□□ -2.42
RIM8P53179 snR73snR73 106 nt-0.15□□□□□ -2.43
RIM8P53179 CDC65tQ(CUG)M 72 nt-0.18□□□□□ -2.44
RIM8P53179 tC(GCA)QtC(GCA)Q 76 nt-0.23□□□□□ -2.45
RIM8P53179 YMR315W-AYMR315W-A 108 nt-0.23□□□□□ -2.45
RIM8P53179 URB1YKL014C 5295 nt-0.31□□□□□ -2.46
RIM8P53179 snR58snR58 96 nt-0.36□□□□□ -2.47
RIM8P53179 YHL009W-BYHL009W-B 5409 nt-0.36□□□□□ -2.47
RIM8P53179 tP(UGG)QtP(UGG)Q 72 nt-0.43□□□□□ -2.48
RIM8P53179 YOR309CYOR309C 381 nt-0.47□□□□□ -2.48
RIM8P53179 snR33snR33 183 nt-0.49□□□□□ -2.49
RIM8P53179 snR87snR87 109 nt-0.7□□□□□ -2.52
RIM8P53179 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
RIM8P53179 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
RIM8P53179 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
RIM8P53179 YNR077CYNR077C 255 nt-0.81□□□□□ -2.54
RIM8P53179 tY(GUA)QtY(GUA)Q 84 nt-0.93□□□□□ -2.56
RIM8P53179 YBR223W-AYBR223W-A 120 nt-0.96□□□□□ -2.56
RIM8P53179 YBR126W-BYBR126W-B 144 nt-1.76□□□□□ -2.69
RIM8P53179 YOL166W-AYOL166W-A 156 nt-2.19□□□□□ -2.76
RIM8P53179 YDR543CYDR543C 300 nt-2.2□□□□□ -2.76
RIM8P53179 YJL136W-AYJL136W-A 84 nt-2.23□□□□□ -2.77
RIM8P53179 YJR162CYJR162C 351 nt-3.36□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 31.3 ms