Protein–RNA interactions for Protein: P53115

INO80, Chromatin-remodeling ATPase INO80, yeastyeast

Predictions only

Length 1,489 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
INO80P53115 YGL041C-BYGL041C-B 183 nt-4.32□□□□□ -3.1
INO80P53115 YGL007C-AYGL007C-A 87 nt-4.37□□□□□ -3.11
INO80P53115 snR61snR61 90 nt-4.38□□□□□ -3.11
INO80P53115 Q0032Q0032 291 nt-4.42□□□□□ -3.12
INO80P53115 YGR122C-AYGR122C-A 129 nt-4.44□□□□□ -3.12
INO80P53115 snR62snR62 100 nt-4.46□□□□□ -3.12
INO80P53115 YNL103W-AYNL103W-A 90 nt-4.46□□□□□ -3.12
INO80P53115 YDL159W-AYDL159W-A 132 nt-4.54□□□□□ -3.14
INO80P53115 YNL170WYNL170W 396 nt-4.64□□□□□ -3.15
INO80P53115 snR64snR64 101 nt-4.68□□□□□ -3.16
INO80P53115 YKL096C-BYKL096C-B 150 nt-4.83□□□□□ -3.18
INO80P53115 snR58snR58 96 nt-4.98□□□□□ -3.21
INO80P53115 snR87snR87 109 nt-5.04□□□□□ -3.22
INO80P53115 YLR294CYLR294C 330 nt-5.07□□□□□ -3.22
INO80P53115 YOR225WYOR225W 330 nt-5.09□□□□□ -3.22
INO80P53115 YMR326CYMR326C 309 nt-5.5□□□□□ -3.29
INO80P53115 snR53snR53 91 nt-5.5□□□□□ -3.29
INO80P53115 YLL066W-BYLL066W-B 171 nt-5.64□□□□□ -3.31
INO80P53115 ATP8Q0080 147 nt-5.66□□□□□ -3.32
INO80P53115 YHR217CYHR217C 462 nt-5.68□□□□□ -3.32
INO80P53115 YLR149C-AYLR149C-A 87 nt-5.68□□□□□ -3.32
INO80P53115 snR40snR40 97 nt-5.77□□□□□ -3.33
INO80P53115 tC(GCA)QtC(GCA)Q 76 nt-5.79□□□□□ -3.34
INO80P53115 Q0143Q0143 153 nt-5.83□□□□□ -3.34
INO80P53115 YJL136W-AYJL136W-A 84 nt-5.91□□□□□ -3.36
INO80P53115 Q0092Q0092 141 nt-6.51□□□□□ -3.45
INO80P53115 YBL109WYBL109W 336 nt-6.6□□□□□ -3.47
INO80P53115 YDL247W-AYDL247W-A 75 nt-6.63□□□□□ -3.47
INO80P53115 snR75snR75 89 nt-7.69□□□□□ -3.64
Retrieved 29 of 7,029 protein–RNA pairs in 54.2 ms