Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 YOL013W-AYOL013W-A 192 nt0.42□□□□□ -2.34
RTF1P53064 tA(UGC)QtA(UGC)Q 76 nt0.32□□□□□ -2.36
RTF1P53064 snR161snR161 161 nt0.26□□□□□ -2.37
RTF1P53064 YJL113WYJL113W 4647 nt0.16□□□□□ -2.38
RTF1P53064 YOR335W-AYOR335W-A 81 nt0.06□□□□□ -2.4
RTF1P53064 RPL41BYDL133C-A 78 nt0.04□□□□□ -2.4
RTF1P53064 snR6snR6 112 nt0.03□□□□□ -2.4
RTF1P53064 snR73snR73 106 nt-0.2□□□□□ -2.44
RTF1P53064 tC(GCA)QtC(GCA)Q 76 nt-0.2□□□□□ -2.44
RTF1P53064 CDC65tQ(CUG)M 72 nt-0.24□□□□□ -2.45
RTF1P53064 YMR315W-AYMR315W-A 108 nt-0.32□□□□□ -2.46
RTF1P53064 snR58snR58 96 nt-0.37□□□□□ -2.47
RTF1P53064 URB1YKL014C 5295 nt-0.41□□□□□ -2.48
RTF1P53064 snR33snR33 183 nt-0.61□□□□□ -2.51
RTF1P53064 YHL009W-BYHL009W-B 5409 nt-0.63□□□□□ -2.51
RTF1P53064 tT(UGU)G1tT(UGU)G1 72 nt-0.63□□□□□ -2.51
RTF1P53064 tT(UGU)G2tT(UGU)G2 72 nt-0.63□□□□□ -2.51
RTF1P53064 tT(UGU)PtT(UGU)P 72 nt-0.63□□□□□ -2.51
RTF1P53064 tP(UGG)QtP(UGG)Q 72 nt-0.64□□□□□ -2.51
RTF1P53064 YOR309CYOR309C 381 nt-0.68□□□□□ -2.52
RTF1P53064 snR87snR87 109 nt-0.96□□□□□ -2.56
RTF1P53064 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
RTF1P53064 YNR077CYNR077C 255 nt-1.08□□□□□ -2.58
RTF1P53064 tY(GUA)QtY(GUA)Q 84 nt-1.16□□□□□ -2.6
RTF1P53064 YBR126W-BYBR126W-B 144 nt-1.65□□□□□ -2.67
RTF1P53064 YDR543CYDR543C 300 nt-2.21□□□□□ -2.76
RTF1P53064 YOL166W-AYOL166W-A 156 nt-2.41□□□□□ -2.8
RTF1P53064 YJR162CYJR162C 351 nt-2.96□□□□□ -2.88
RTF1P53064 YJL136W-AYJL136W-A 84 nt-3.04□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 6.3 ms