Protein–RNA interactions for Protein: P47976

CTH1, mRNA decay factor CTH1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTH1P47976 snR128snR128 126 nt0.49□□□□□ -2.33
CTH1P47976 snR161snR161 161 nt0.34□□□□□ -2.36
CTH1P47976 YOL013W-AYOL013W-A 192 nt0.33□□□□□ -2.36
CTH1P47976 RPL41BYDL133C-A 78 nt0.32□□□□□ -2.36
CTH1P47976 tA(UGC)QtA(UGC)Q 76 nt0.3□□□□□ -2.36
CTH1P47976 YOR335W-AYOR335W-A 81 nt0.26□□□□□ -2.37
CTH1P47976 tC(GCA)QtC(GCA)Q 76 nt0.22□□□□□ -2.37
CTH1P47976 snR6snR6 112 nt0.17□□□□□ -2.38
CTH1P47976 snR73snR73 106 nt0.05□□□□□ -2.4
CTH1P47976 snR58snR58 96 nt0.04□□□□□ -2.4
CTH1P47976 CDC65tQ(CUG)M 72 nt-0.06□□□□□ -2.42
CTH1P47976 YMR315W-AYMR315W-A 108 nt-0.07□□□□□ -2.42
CTH1P47976 YNR077CYNR077C 255 nt-0.12□□□□□ -2.43
CTH1P47976 YHL009W-BYHL009W-B 5409 nt-0.19□□□□□ -2.44
CTH1P47976 URB1YKL014C 5295 nt-0.2□□□□□ -2.44
CTH1P47976 YOR309CYOR309C 381 nt-0.36□□□□□ -2.47
CTH1P47976 tP(UGG)QtP(UGG)Q 72 nt-0.37□□□□□ -2.47
CTH1P47976 snR33snR33 183 nt-0.42□□□□□ -2.48
CTH1P47976 snR87snR87 109 nt-0.45□□□□□ -2.48
CTH1P47976 tT(UGU)G1tT(UGU)G1 72 nt-0.53□□□□□ -2.49
CTH1P47976 tT(UGU)G2tT(UGU)G2 72 nt-0.53□□□□□ -2.49
CTH1P47976 tT(UGU)PtT(UGU)P 72 nt-0.53□□□□□ -2.49
CTH1P47976 tY(GUA)QtY(GUA)Q 84 nt-0.81□□□□□ -2.54
CTH1P47976 YBR223W-AYBR223W-A 120 nt-0.84□□□□□ -2.54
CTH1P47976 YOL166W-AYOL166W-A 156 nt-1.32□□□□□ -2.62
CTH1P47976 YBR126W-BYBR126W-B 144 nt-1.42□□□□□ -2.64
CTH1P47976 YJL136W-AYJL136W-A 84 nt-1.9□□□□□ -2.71
CTH1P47976 YDR543CYDR543C 300 nt-1.97□□□□□ -2.72
CTH1P47976 YJR162CYJR162C 351 nt-2.59□□□□□ -2.82
Retrieved 29 of 7,029 protein–RNA pairs in 49.5 ms