Protein–RNA interactions for Protein: P47082

AVT1, Vacuolar amino acid transporter 1, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT1P47082 YOR335W-AYOR335W-A 81 nt0.52□□□□□ -2.33
AVT1P47082 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
AVT1P47082 snR6snR6 112 nt0.49□□□□□ -2.33
AVT1P47082 RPL41BYDL133C-A 78 nt0.45□□□□□ -2.34
AVT1P47082 snR128snR128 126 nt0.45□□□□□ -2.34
AVT1P47082 tA(UGC)QtA(UGC)Q 76 nt0.39□□□□□ -2.35
AVT1P47082 snR161snR161 161 nt0.39□□□□□ -2.35
AVT1P47082 snR73snR73 106 nt0.34□□□□□ -2.36
AVT1P47082 snR58snR58 96 nt0.32□□□□□ -2.36
AVT1P47082 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
AVT1P47082 CDC65tQ(CUG)M 72 nt0.13□□□□□ -2.39
AVT1P47082 URB1YKL014C 5295 nt0.11□□□□□ -2.39
AVT1P47082 YMR315W-AYMR315W-A 108 nt0.05□□□□□ -2.4
AVT1P47082 snR87snR87 109 nt-0.11□□□□□ -2.43
AVT1P47082 YOR309CYOR309C 381 nt-0.12□□□□□ -2.43
AVT1P47082 YHL009W-BYHL009W-B 5409 nt-0.15□□□□□ -2.43
AVT1P47082 tP(UGG)QtP(UGG)Q 72 nt-0.25□□□□□ -2.45
AVT1P47082 snR33snR33 183 nt-0.34□□□□□ -2.46
AVT1P47082 tT(UGU)G1tT(UGU)G1 72 nt-0.57□□□□□ -2.5
AVT1P47082 tT(UGU)G2tT(UGU)G2 72 nt-0.57□□□□□ -2.5
AVT1P47082 tT(UGU)PtT(UGU)P 72 nt-0.57□□□□□ -2.5
AVT1P47082 tY(GUA)QtY(GUA)Q 84 nt-0.66□□□□□ -2.52
AVT1P47082 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
AVT1P47082 YNR077CYNR077C 255 nt-1.23□□□□□ -2.61
AVT1P47082 YBR126W-BYBR126W-B 144 nt-1.35□□□□□ -2.63
AVT1P47082 YJL136W-AYJL136W-A 84 nt-1.51□□□□□ -2.65
AVT1P47082 YDR543CYDR543C 300 nt-2.19□□□□□ -2.76
AVT1P47082 YOL166W-AYOL166W-A 156 nt-2.66□□□□□ -2.84
AVT1P47082 YJR162CYJR162C 351 nt-2.72□□□□□ -2.84
Retrieved 29 of 7,029 protein–RNA pairs in 6.9 ms