Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 YDR543CYDR543C 300 nt-2.08□□□□□ -2.74
PGD1P40356 snR62snR62 100 nt-2.11□□□□□ -2.75
PGD1P40356 snR85snR85 171 nt-2.11□□□□□ -2.75
PGD1P40356 YDL159W-AYDL159W-A 132 nt-2.13□□□□□ -2.75
PGD1P40356 YGR122C-AYGR122C-A 129 nt-2.18□□□□□ -2.76
PGD1P40356 YNL170WYNL170W 396 nt-2.18□□□□□ -2.76
PGD1P40356 snR64snR64 101 nt-2.25□□□□□ -2.77
PGD1P40356 YOR225WYOR225W 330 nt-2.27□□□□□ -2.77
PGD1P40356 YLR294CYLR294C 330 nt-2.28□□□□□ -2.77
PGD1P40356 YDR524C-AYDR524C-A 120 nt-2.33□□□□□ -2.78
PGD1P40356 YOL166W-AYOL166W-A 156 nt-2.34□□□□□ -2.78
PGD1P40356 YKL096C-BYKL096C-B 150 nt-2.47□□□□□ -2.8
PGD1P40356 ATP8Q0080 147 nt-2.51□□□□□ -2.81
PGD1P40356 snR87snR87 109 nt-2.59□□□□□ -2.82
PGD1P40356 Q0143Q0143 153 nt-2.64□□□□□ -2.83
PGD1P40356 YHR217CYHR217C 462 nt-2.64□□□□□ -2.83
PGD1P40356 snR53snR53 91 nt-2.65□□□□□ -2.83
PGD1P40356 YMR326CYMR326C 309 nt-2.66□□□□□ -2.84
PGD1P40356 YLL066W-BYLL066W-B 171 nt-2.67□□□□□ -2.84
PGD1P40356 snR58snR58 96 nt-2.72□□□□□ -2.84
PGD1P40356 YLR149C-AYLR149C-A 87 nt-2.72□□□□□ -2.84
PGD1P40356 YJR162CYJR162C 351 nt-2.9□□□□□ -2.87
PGD1P40356 Q0092Q0092 141 nt-2.93□□□□□ -2.88
PGD1P40356 YBL109WYBL109W 336 nt-2.95□□□□□ -2.88
PGD1P40356 snR40snR40 97 nt-2.95□□□□□ -2.88
PGD1P40356 tC(GCA)QtC(GCA)Q 76 nt-3.06□□□□□ -2.9
PGD1P40356 YDL247W-AYDL247W-A 75 nt-3.24□□□□□ -2.93
PGD1P40356 YJL136W-AYJL136W-A 84 nt-3.47□□□□□ -2.96
PGD1P40356 snR75snR75 89 nt-3.93□□□□□ -3.04
Retrieved 29 of 7,029 protein–RNA pairs in 6.2 ms