Protein–RNA interactions for Protein: P40202

CCS1, Superoxide dismutase 1 copper chaperone, yeastyeast

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCS1P40202 YDR543CYDR543C 300 nt-2.82□□□□□ -2.86
CCS1P40202 YNL103W-AYNL103W-A 90 nt-2.86□□□□□ -2.87
CCS1P40202 Q0142Q0142 177 nt-2.88□□□□□ -2.87
CCS1P40202 snR62snR62 100 nt-2.9□□□□□ -2.87
CCS1P40202 snR87snR87 109 nt-2.91□□□□□ -2.88
CCS1P40202 snR61snR61 90 nt-2.93□□□□□ -2.88
CCS1P40202 YKL096C-BYKL096C-B 150 nt-2.95□□□□□ -2.88
CCS1P40202 snR64snR64 101 nt-2.96□□□□□ -2.88
CCS1P40202 YNL170WYNL170W 396 nt-2.99□□□□□ -2.89
CCS1P40202 YOL166W-AYOL166W-A 156 nt-3.09□□□□□ -2.9
CCS1P40202 Q0032Q0032 291 nt-3.16□□□□□ -2.92
CCS1P40202 YLR294CYLR294C 330 nt-3.16□□□□□ -2.92
CCS1P40202 snR58snR58 96 nt-3.21□□□□□ -2.92
CCS1P40202 YOR225WYOR225W 330 nt-3.29□□□□□ -2.94
CCS1P40202 YLR149C-AYLR149C-A 87 nt-3.51□□□□□ -2.97
CCS1P40202 snR53snR53 91 nt-3.51□□□□□ -2.97
CCS1P40202 snR40snR40 97 nt-3.57□□□□□ -2.98
CCS1P40202 YLL066W-BYLL066W-B 171 nt-3.6□□□□□ -2.99
CCS1P40202 tC(GCA)QtC(GCA)Q 76 nt-3.61□□□□□ -2.99
CCS1P40202 YHR217CYHR217C 462 nt-3.71□□□□□ -3
CCS1P40202 YMR326CYMR326C 309 nt-3.75□□□□□ -3.01
CCS1P40202 ATP8Q0080 147 nt-3.77□□□□□ -3.01
CCS1P40202 Q0143Q0143 153 nt-3.81□□□□□ -3.02
CCS1P40202 YJR162CYJR162C 351 nt-3.88□□□□□ -3.03
CCS1P40202 YJL136W-AYJL136W-A 84 nt-4.05□□□□□ -3.06
CCS1P40202 YBL109WYBL109W 336 nt-4.08□□□□□ -3.06
CCS1P40202 Q0092Q0092 141 nt-4.34□□□□□ -3.1
CCS1P40202 YDL247W-AYDL247W-A 75 nt-4.41□□□□□ -3.12
CCS1P40202 snR75snR75 89 nt-4.88□□□□□ -3.19
Retrieved 29 of 7,029 protein–RNA pairs in 27.4 ms