Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 snR65snR65 100 nt-6.02□□□□□ -3.37
TRA1P38811 YNR025CYNR025C 360 nt-6.12□□□□□ -3.39
TRA1P38811 YDL240C-AYDL240C-A 138 nt-6.16□□□□□ -3.4
TRA1P38811 snR62snR62 100 nt-6.19□□□□□ -3.4
TRA1P38811 YCL001W-BYCL001W-B 255 nt-6.25□□□□□ -3.41
TRA1P38811 Q0017Q0017 162 nt-6.3□□□□□ -3.42
TRA1P38811 YLR149C-AYLR149C-A 87 nt-6.48□□□□□ -3.45
TRA1P38811 YGL041C-BYGL041C-B 183 nt-6.69□□□□□ -3.48
TRA1P38811 YNL103W-AYNL103W-A 90 nt-6.76□□□□□ -3.49
TRA1P38811 YOR231C-AYOR231C-A 201 nt-6.79□□□□□ -3.5
TRA1P38811 YMR046W-AYMR046W-A 129 nt-6.8□□□□□ -3.5
TRA1P38811 snR53snR53 91 nt-6.86□□□□□ -3.51
TRA1P38811 snR61snR61 90 nt-6.87□□□□□ -3.51
TRA1P38811 YMR326CYMR326C 309 nt-6.96□□□□□ -3.52
TRA1P38811 YNL338WYNL338W 159 nt-7.03□□□□□ -3.53
TRA1P38811 tR(UCU)Q1tR(UCU)Q1 73 nt-7.25□□□□□ -3.57
TRA1P38811 YLR466C-BYLR466C-B 117 nt-7.27□□□□□ -3.57
TRA1P38811 VAR1Q0140 1197 nt-7.31□□□□□ -3.58
TRA1P38811 YLL066W-BYLL066W-B 171 nt-7.52□□□□□ -3.61
TRA1P38811 Q0032Q0032 291 nt-7.53□□□□□ -3.61
TRA1P38811 tM(CAU)Q1tM(CAU)Q1 76 nt-7.72□□□□□ -3.65
TRA1P38811 YHR217CYHR217C 462 nt-7.98□□□□□ -3.69
TRA1P38811 snR75snR75 89 nt-8.19□□□□□ -3.72
TRA1P38811 tR(ACG)Q2tR(ACG)Q2 74 nt-8.51□□□□□ -3.77
TRA1P38811 YDL247W-AYDL247W-A 75 nt-9.07□□□□□ -3.86
TRA1P38811 ATP8Q0080 147 nt-9.36□□□□□ -3.91
TRA1P38811 YBL109WYBL109W 336 nt-9.42□□□□□ -3.92
TRA1P38811 Q0144Q0144 330 nt-10.29□□□□□ -4.06
TRA1P38811 Q0092Q0092 141 nt-10.47□□□□□ -4.09
Retrieved 29 of 7,029 protein–RNA pairs in 5.7 ms