Protein–RNA interactions for Protein: P38759

VPS29, Vacuolar protein sorting-associated protein 29, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS29P38759 UTP10YJL109C 5310 nt0.73□□□□□ -2.29
VPS29P38759 RPL41BYDL133C-A 78 nt0.69□□□□□ -2.3
VPS29P38759 tC(GCA)QtC(GCA)Q 76 nt0.69□□□□□ -2.3
VPS29P38759 snR161snR161 161 nt0.59□□□□□ -2.31
VPS29P38759 tA(UGC)QtA(UGC)Q 76 nt0.55□□□□□ -2.32
VPS29P38759 YOR335W-AYOR335W-A 81 nt0.53□□□□□ -2.32
VPS29P38759 YOL013W-AYOL013W-A 192 nt0.51□□□□□ -2.33
VPS29P38759 snR6snR6 112 nt0.43□□□□□ -2.34
VPS29P38759 snR58snR58 96 nt0.41□□□□□ -2.34
VPS29P38759 snR73snR73 106 nt0.24□□□□□ -2.37
VPS29P38759 CDC65tQ(CUG)M 72 nt0.02□□□□□ -2.41
VPS29P38759 YMR315W-AYMR315W-A 108 nt-0.03□□□□□ -2.41
VPS29P38759 URB1YKL014C 5295 nt-0.06□□□□□ -2.42
VPS29P38759 YHL009W-BYHL009W-B 5409 nt-0.14□□□□□ -2.43
VPS29P38759 YOR309CYOR309C 381 nt-0.45□□□□□ -2.48
VPS29P38759 YNR077CYNR077C 255 nt-0.47□□□□□ -2.48
VPS29P38759 snR87snR87 109 nt-0.51□□□□□ -2.49
VPS29P38759 snR33snR33 183 nt-0.55□□□□□ -2.5
VPS29P38759 tP(UGG)QtP(UGG)Q 72 nt-0.56□□□□□ -2.5
VPS29P38759 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
VPS29P38759 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
VPS29P38759 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
VPS29P38759 YBR223W-AYBR223W-A 120 nt-0.96□□□□□ -2.56
VPS29P38759 tY(GUA)QtY(GUA)Q 84 nt-1.06□□□□□ -2.58
VPS29P38759 YBR126W-BYBR126W-B 144 nt-1.82□□□□□ -2.7
VPS29P38759 YOL166W-AYOL166W-A 156 nt-1.89□□□□□ -2.71
VPS29P38759 YDR543CYDR543C 300 nt-2.14□□□□□ -2.75
VPS29P38759 YJL136W-AYJL136W-A 84 nt-2.67□□□□□ -2.84
VPS29P38759 YJR162CYJR162C 351 nt-3.47□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 2.6 ms