Protein–RNA interactions for Protein: P38337

SHG1, COMPASS component SHG1, yeastyeast

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHG1P38337 YGL041C-BYGL041C-B 183 nt-4.16□□□□□ -3.08
SHG1P38337 YDL159W-AYDL159W-A 132 nt-4.19□□□□□ -3.08
SHG1P38337 YGL007C-AYGL007C-A 87 nt-4.19□□□□□ -3.08
SHG1P38337 snR87snR87 109 nt-4.26□□□□□ -3.09
SHG1P38337 snR62snR62 100 nt-4.3□□□□□ -3.1
SHG1P38337 snR61snR61 90 nt-4.33□□□□□ -3.1
SHG1P38337 YNL103W-AYNL103W-A 90 nt-4.34□□□□□ -3.1
SHG1P38337 YKL096C-BYKL096C-B 150 nt-4.41□□□□□ -3.12
SHG1P38337 snR64snR64 101 nt-4.43□□□□□ -3.12
SHG1P38337 YNL170WYNL170W 396 nt-4.48□□□□□ -3.13
SHG1P38337 Q0032Q0032 291 nt-4.62□□□□□ -3.15
SHG1P38337 snR58snR58 96 nt-4.64□□□□□ -3.15
SHG1P38337 YJR162CYJR162C 351 nt-4.69□□□□□ -3.16
SHG1P38337 YLR294CYLR294C 330 nt-4.75□□□□□ -3.17
SHG1P38337 YOR225WYOR225W 330 nt-4.86□□□□□ -3.19
SHG1P38337 snR53snR53 91 nt-5.22□□□□□ -3.25
SHG1P38337 tC(GCA)QtC(GCA)Q 76 nt-5.27□□□□□ -3.25
SHG1P38337 YLR149C-AYLR149C-A 87 nt-5.28□□□□□ -3.25
SHG1P38337 snR40snR40 97 nt-5.33□□□□□ -3.26
SHG1P38337 YLL066W-BYLL066W-B 171 nt-5.38□□□□□ -3.27
SHG1P38337 YHR217CYHR217C 462 nt-5.51□□□□□ -3.29
SHG1P38337 YMR326CYMR326C 309 nt-5.53□□□□□ -3.29
SHG1P38337 YJL136W-AYJL136W-A 84 nt-5.55□□□□□ -3.3
SHG1P38337 ATP8Q0080 147 nt-5.63□□□□□ -3.31
SHG1P38337 Q0143Q0143 153 nt-5.72□□□□□ -3.33
SHG1P38337 YBL109WYBL109W 336 nt-6.19□□□□□ -3.4
SHG1P38337 Q0092Q0092 141 nt-6.47□□□□□ -3.45
SHG1P38337 YDL247W-AYDL247W-A 75 nt-6.48□□□□□ -3.45
SHG1P38337 snR75snR75 89 nt-7.22□□□□□ -3.57
Retrieved 29 of 7,029 protein–RNA pairs in 74.8 ms