Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
PUB1P32588 snR161snR161 161 nt0.31□□□□□ -2.36
PUB1P32588 tA(UGC)QtA(UGC)Q 76 nt0.3□□□□□ -2.36
PUB1P32588 YOR335W-AYOR335W-A 81 nt0.29□□□□□ -2.36
PUB1P32588 snR6snR6 112 nt0.23□□□□□ -2.37
PUB1P32588 RPL41BYDL133C-A 78 nt0.22□□□□□ -2.37
PUB1P32588 tC(GCA)QtC(GCA)Q 76 nt0.15□□□□□ -2.39
PUB1P32588 YJL113WYJL113W 4647 nt0.12□□□□□ -2.39
PUB1P32588 snR73snR73 106 nt0.08□□□□□ -2.4
PUB1P32588 snR58snR58 96 nt-0.04□□□□□ -2.42
PUB1P32588 CDC65tQ(CUG)M 72 nt-0.04□□□□□ -2.42
PUB1P32588 YMR315W-AYMR315W-A 108 nt-0.09□□□□□ -2.42
PUB1P32588 URB1YKL014C 5295 nt-0.17□□□□□ -2.44
PUB1P32588 YHL009W-BYHL009W-B 5409 nt-0.3□□□□□ -2.46
PUB1P32588 YOR309CYOR309C 381 nt-0.32□□□□□ -2.46
PUB1P32588 tP(UGG)QtP(UGG)Q 72 nt-0.35□□□□□ -2.47
PUB1P32588 snR33snR33 183 nt-0.43□□□□□ -2.48
PUB1P32588 snR87snR87 109 nt-0.44□□□□□ -2.48
PUB1P32588 tT(UGU)G1tT(UGU)G1 72 nt-0.58□□□□□ -2.5
PUB1P32588 tT(UGU)G2tT(UGU)G2 72 nt-0.58□□□□□ -2.5
PUB1P32588 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
PUB1P32588 YBR223W-AYBR223W-A 120 nt-0.83□□□□□ -2.54
PUB1P32588 tY(GUA)QtY(GUA)Q 84 nt-0.84□□□□□ -2.54
PUB1P32588 YNR077CYNR077C 255 nt-0.95□□□□□ -2.56
PUB1P32588 YBR126W-BYBR126W-B 144 nt-1.52□□□□□ -2.65
PUB1P32588 YDR543CYDR543C 300 nt-1.91□□□□□ -2.72
PUB1P32588 YJL136W-AYJL136W-A 84 nt-1.96□□□□□ -2.72
PUB1P32588 YOL166W-AYOL166W-A 156 nt-2.21□□□□□ -2.76
PUB1P32588 YJR162CYJR162C 351 nt-2.62□□□□□ -2.83
Retrieved 29 of 7,029 protein–RNA pairs in 270.5 ms