Protein–RNA interactions for Protein: P32558

SPT16, FACT complex subunit SPT16, yeastyeast

Known RBP Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT16P32558 snR128snR128 126 nt0.56□□□□□ -2.32
SPT16P32558 tA(UGC)QtA(UGC)Q 76 nt0.47□□□□□ -2.33
SPT16P32558 YOR335W-AYOR335W-A 81 nt0.46□□□□□ -2.34
SPT16P32558 snR6snR6 112 nt0.45□□□□□ -2.34
SPT16P32558 YOL013W-AYOL013W-A 192 nt0.43□□□□□ -2.34
SPT16P32558 tC(GCA)QtC(GCA)Q 76 nt0.42□□□□□ -2.34
SPT16P32558 snR161snR161 161 nt0.39□□□□□ -2.35
SPT16P32558 RPL41BYDL133C-A 78 nt0.38□□□□□ -2.35
SPT16P32558 snR73snR73 106 nt0.23□□□□□ -2.37
SPT16P32558 snR58snR58 96 nt0.17□□□□□ -2.38
SPT16P32558 CDC65tQ(CUG)M 72 nt0.05□□□□□ -2.4
SPT16P32558 URB1YKL014C 5295 nt0.04□□□□□ -2.4
SPT16P32558 YHL009W-BYHL009W-B 5409 nt-0.1□□□□□ -2.43
SPT16P32558 YMR315W-AYMR315W-A 108 nt-0.1□□□□□ -2.43
SPT16P32558 YOR309CYOR309C 381 nt-0.37□□□□□ -2.47
SPT16P32558 snR87snR87 109 nt-0.44□□□□□ -2.48
SPT16P32558 tP(UGG)QtP(UGG)Q 72 nt-0.47□□□□□ -2.48
SPT16P32558 snR33snR33 183 nt-0.48□□□□□ -2.49
SPT16P32558 tT(UGU)G1tT(UGU)G1 72 nt-0.62□□□□□ -2.51
SPT16P32558 tT(UGU)G2tT(UGU)G2 72 nt-0.62□□□□□ -2.51
SPT16P32558 tT(UGU)PtT(UGU)P 72 nt-0.62□□□□□ -2.51
SPT16P32558 YNR077CYNR077C 255 nt-0.63□□□□□ -2.51
SPT16P32558 YBR223W-AYBR223W-A 120 nt-0.87□□□□□ -2.55
SPT16P32558 tY(GUA)QtY(GUA)Q 84 nt-0.92□□□□□ -2.56
SPT16P32558 YBR126W-BYBR126W-B 144 nt-1.62□□□□□ -2.67
SPT16P32558 YOL166W-AYOL166W-A 156 nt-1.8□□□□□ -2.7
SPT16P32558 YDR543CYDR543C 300 nt-2.04□□□□□ -2.74
SPT16P32558 YJL136W-AYJL136W-A 84 nt-2.25□□□□□ -2.77
SPT16P32558 YJR162CYJR162C 351 nt-2.89□□□□□ -2.87
Retrieved 29 of 7,029 protein–RNA pairs in 43.6 ms