Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 snR87snR87 109 nt-3.04□□□□□ -2.9
CDC39P25655 YDR034C-AYDR034C-A 177 nt-3.04□□□□□ -2.9
CDC39P25655 snR58snR58 96 nt-3.05□□□□□ -2.9
CDC39P25655 YNL338WYNL338W 159 nt-3.07□□□□□ -2.9
CDC39P25655 YDL159W-AYDL159W-A 132 nt-3.09□□□□□ -2.9
CDC39P25655 YGL007C-AYGL007C-A 87 nt-3.13□□□□□ -2.91
CDC39P25655 snR62snR62 100 nt-3.17□□□□□ -2.92
CDC39P25655 YGL041C-BYGL041C-B 183 nt-3.17□□□□□ -2.92
CDC39P25655 YKL096C-BYKL096C-B 150 nt-3.19□□□□□ -2.92
CDC39P25655 YNL170WYNL170W 396 nt-3.21□□□□□ -2.92
CDC39P25655 snR64snR64 101 nt-3.29□□□□□ -2.94
CDC39P25655 YOR225WYOR225W 330 nt-3.34□□□□□ -2.94
CDC39P25655 snR61snR61 90 nt-3.35□□□□□ -2.95
CDC39P25655 Q0032Q0032 291 nt-3.41□□□□□ -2.96
CDC39P25655 tC(GCA)QtC(GCA)Q 76 nt-3.52□□□□□ -2.97
CDC39P25655 snR40snR40 97 nt-3.52□□□□□ -2.97
CDC39P25655 YLR294CYLR294C 330 nt-3.56□□□□□ -2.98
CDC39P25655 YJL136W-AYJL136W-A 84 nt-3.77□□□□□ -3.01
CDC39P25655 snR53snR53 91 nt-3.85□□□□□ -3.03
CDC39P25655 YLR149C-AYLR149C-A 87 nt-3.86□□□□□ -3.03
CDC39P25655 YHR217CYHR217C 462 nt-3.91□□□□□ -3.03
CDC39P25655 YMR326CYMR326C 309 nt-3.91□□□□□ -3.03
CDC39P25655 YLL066W-BYLL066W-B 171 nt-4.03□□□□□ -3.05
CDC39P25655 ATP8Q0080 147 nt-4.17□□□□□ -3.08
CDC39P25655 Q0143Q0143 153 nt-4.27□□□□□ -3.09
CDC39P25655 Q0092Q0092 141 nt-4.54□□□□□ -3.14
CDC39P25655 YBL109WYBL109W 336 nt-4.57□□□□□ -3.14
CDC39P25655 YDL247W-AYDL247W-A 75 nt-4.63□□□□□ -3.15
CDC39P25655 snR75snR75 89 nt-5.02□□□□□ -3.21
Retrieved 29 of 7,029 protein–RNA pairs in 6.5 ms