Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 YNL338WYNL338W 159 nt-3.52□□□□□ -2.97
RPL40AP0CH08 YDL159W-AYDL159W-A 132 nt-3.54□□□□□ -2.98
RPL40AP0CH08 snR87snR87 109 nt-3.58□□□□□ -2.98
RPL40AP0CH08 YGL041C-BYGL041C-B 183 nt-3.59□□□□□ -2.98
RPL40AP0CH08 YKL096C-BYKL096C-B 150 nt-3.6□□□□□ -2.99
RPL40AP0CH08 YGL007C-AYGL007C-A 87 nt-3.61□□□□□ -2.99
RPL40AP0CH08 snR62snR62 100 nt-3.71□□□□□ -3
RPL40AP0CH08 snR58snR58 96 nt-3.74□□□□□ -3.01
RPL40AP0CH08 snR61snR61 90 nt-3.76□□□□□ -3.01
RPL40AP0CH08 snR64snR64 101 nt-3.76□□□□□ -3.01
RPL40AP0CH08 YNL103W-AYNL103W-A 90 nt-3.78□□□□□ -3.01
RPL40AP0CH08 YNL170WYNL170W 396 nt-3.84□□□□□ -3.02
RPL40AP0CH08 YLR294CYLR294C 330 nt-3.99□□□□□ -3.05
RPL40AP0CH08 YOR225WYOR225W 330 nt-4.01□□□□□ -3.05
RPL40AP0CH08 Q0032Q0032 291 nt-4.03□□□□□ -3.05
RPL40AP0CH08 tC(GCA)QtC(GCA)Q 76 nt-4.29□□□□□ -3.1
RPL40AP0CH08 snR40snR40 97 nt-4.36□□□□□ -3.11
RPL40AP0CH08 snR53snR53 91 nt-4.44□□□□□ -3.12
RPL40AP0CH08 YLR149C-AYLR149C-A 87 nt-4.47□□□□□ -3.13
RPL40AP0CH08 YLL066W-BYLL066W-B 171 nt-4.58□□□□□ -3.14
RPL40AP0CH08 YJL136W-AYJL136W-A 84 nt-4.63□□□□□ -3.15
RPL40AP0CH08 YMR326CYMR326C 309 nt-4.73□□□□□ -3.17
RPL40AP0CH08 YHR217CYHR217C 462 nt-4.77□□□□□ -3.17
RPL40AP0CH08 ATP8Q0080 147 nt-4.97□□□□□ -3.21
RPL40AP0CH08 Q0143Q0143 153 nt-4.99□□□□□ -3.21
RPL40AP0CH08 YBL109WYBL109W 336 nt-5.39□□□□□ -3.27
RPL40AP0CH08 YDL247W-AYDL247W-A 75 nt-5.5□□□□□ -3.29
RPL40AP0CH08 Q0092Q0092 141 nt-5.67□□□□□ -3.32
RPL40AP0CH08 snR75snR75 89 nt-5.95□□□□□ -3.36
Retrieved 29 of 7,029 protein–RNA pairs in 36.3 ms