Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-HP0C2I4 tT(AGU)O2tT(AGU)O2 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 RPL41BYDL133C-A 78 nt0.46□□□□□ -2.34
TY1A-HP0C2I4 snR161snR161 161 nt0.44□□□□□ -2.34
TY1A-HP0C2I4 tA(UGC)QtA(UGC)Q 76 nt0.42□□□□□ -2.34
TY1A-HP0C2I4 YOL013W-AYOL013W-A 192 nt0.41□□□□□ -2.34
TY1A-HP0C2I4 tC(GCA)QtC(GCA)Q 76 nt0.35□□□□□ -2.35
TY1A-HP0C2I4 YOR335W-AYOR335W-A 81 nt0.35□□□□□ -2.35
TY1A-HP0C2I4 snR6snR6 112 nt0.3□□□□□ -2.36
TY1A-HP0C2I4 snR58snR58 96 nt0.16□□□□□ -2.38
TY1A-HP0C2I4 snR73snR73 106 nt0.12□□□□□ -2.39
TY1A-HP0C2I4 CDC65tQ(CUG)M 72 nt-0.03□□□□□ -2.41
TY1A-HP0C2I4 YMR315W-AYMR315W-A 108 nt-0.07□□□□□ -2.42
TY1A-HP0C2I4 URB1YKL014C 5295 nt-0.14□□□□□ -2.43
TY1A-HP0C2I4 YHL009W-BYHL009W-B 5409 nt-0.24□□□□□ -2.45
TY1A-HP0C2I4 YOR309CYOR309C 381 nt-0.38□□□□□ -2.47
TY1A-HP0C2I4 YNR077CYNR077C 255 nt-0.41□□□□□ -2.48
TY1A-HP0C2I4 tP(UGG)QtP(UGG)Q 72 nt-0.45□□□□□ -2.48
TY1A-HP0C2I4 snR33snR33 183 nt-0.47□□□□□ -2.48
TY1A-HP0C2I4 snR87snR87 109 nt-0.48□□□□□ -2.49
TY1A-HP0C2I4 tT(UGU)G1tT(UGU)G1 72 nt-0.55□□□□□ -2.5
TY1A-HP0C2I4 tT(UGU)G2tT(UGU)G2 72 nt-0.55□□□□□ -2.5
TY1A-HP0C2I4 tT(UGU)PtT(UGU)P 72 nt-0.55□□□□□ -2.5
TY1A-HP0C2I4 YBR223W-AYBR223W-A 120 nt-0.69□□□□□ -2.52
TY1A-HP0C2I4 tY(GUA)QtY(GUA)Q 84 nt-0.9□□□□□ -2.55
TY1A-HP0C2I4 YOL166W-AYOL166W-A 156 nt-1.27□□□□□ -2.61
TY1A-HP0C2I4 YBR126W-BYBR126W-B 144 nt-1.5□□□□□ -2.65
TY1A-HP0C2I4 YDR543CYDR543C 300 nt-1.58□□□□□ -2.66
TY1A-HP0C2I4 YJL136W-AYJL136W-A 84 nt-2.18□□□□□ -2.76
TY1A-HP0C2I4 YJR162CYJR162C 351 nt-2.56□□□□□ -2.82
Retrieved 29 of 7,029 protein–RNA pairs in 38.1 ms