Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
R3hdm1E9Q9Q2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3hdm1E9Q9Q2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.88■□□□□ 0.61
R3hdm1E9Q9Q2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3hdm1E9Q9Q2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3hdm1E9Q9Q2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3hdm1E9Q9Q2 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
R3hdm1E9Q9Q2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm1E9Q9Q2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm1E9Q9Q2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.84■□□□□ 0.61
R3hdm1E9Q9Q2 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.83■□□□□ 0.61
R3hdm1E9Q9Q2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3hdm1E9Q9Q2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3hdm1E9Q9Q2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3hdm1E9Q9Q2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.83■□□□□ 0.61
R3hdm1E9Q9Q2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
R3hdm1E9Q9Q2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 Gm24841-201ENSMUST00000158676 357 ntBASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 Gm27742-201ENSMUST00000184667 60 ntBASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.83■□□□□ 0.6
R3hdm1E9Q9Q2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms