Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	YOL013W-A	YOL013W-A	192 nt		0.36	□□□□□ -2.35
TY4B-P	A0A0B7P3V8	tA(UGC)Q	tA(UGC)Q	76 nt		0.23	□□□□□ -2.37
TY4B-P	A0A0B7P3V8	snR161	snR161	161 nt		0.16	□□□□□ -2.38
TY4B-P	A0A0B7P3V8	YJL113W	YJL113W	4647 nt		0.01	□□□□□ -2.41
TY4B-P	A0A0B7P3V8	YOR335W-A	YOR335W-A	81 nt		-0.03	□□□□□ -2.41
TY4B-P	A0A0B7P3V8	RPL41B	YDL133C-A	78 nt		-0.06	□□□□□ -2.42
TY4B-P	A0A0B7P3V8	snR6	snR6	112 nt		-0.11	□□□□□ -2.43
TY4B-P	A0A0B7P3V8	CDC65	tQ(CUG)M	72 nt		-0.24	□□□□□ -2.45
TY4B-P	A0A0B7P3V8	snR73	snR73	106 nt		-0.26	□□□□□ -2.45
TY4B-P	A0A0B7P3V8	tC(GCA)Q	tC(GCA)Q	76 nt		-0.3	□□□□□ -2.46
TY4B-P	A0A0B7P3V8	YMR315W-A	YMR315W-A	108 nt		-0.32	□□□□□ -2.46
TY4B-P	A0A0B7P3V8	URB1	YKL014C	5295 nt		-0.43	□□□□□ -2.48
TY4B-P	A0A0B7P3V8	snR58	snR58	96 nt		-0.44	□□□□□ -2.48
TY4B-P	A0A0B7P3V8	YHL009W-B	YHL009W-B	5409 nt		-0.56	□□□□□ -2.5
TY4B-P	A0A0B7P3V8	tP(UGG)Q	tP(UGG)Q	72 nt		-0.56	□□□□□ -2.5
TY4B-P	A0A0B7P3V8	snR33	snR33	183 nt		-0.57	□□□□□ -2.5
TY4B-P	A0A0B7P3V8	tT(UGU)G1	tT(UGU)G1	72 nt		-0.63	□□□□□ -2.51
TY4B-P	A0A0B7P3V8	tT(UGU)G2	tT(UGU)G2	72 nt		-0.63	□□□□□ -2.51
TY4B-P	A0A0B7P3V8	tT(UGU)P	tT(UGU)P	72 nt		-0.63	□□□□□ -2.51
TY4B-P	A0A0B7P3V8	YNR077C	YNR077C	255 nt		-0.64	□□□□□ -2.51
TY4B-P	A0A0B7P3V8	YOR309C	YOR309C	381 nt		-0.65	□□□□□ -2.51
TY4B-P	A0A0B7P3V8	YBR223W-A	YBR223W-A	120 nt		-0.81	□□□□□ -2.54
TY4B-P	A0A0B7P3V8	snR87	snR87	109 nt		-0.92	□□□□□ -2.56
TY4B-P	A0A0B7P3V8	tY(GUA)Q	tY(GUA)Q	84 nt		-1.08	□□□□□ -2.58
TY4B-P	A0A0B7P3V8	YBR126W-B	YBR126W-B	144 nt		-1.72	□□□□□ -2.68
TY4B-P	A0A0B7P3V8	YOL166W-A	YOL166W-A	156 nt		-1.74	□□□□□ -2.69
TY4B-P	A0A0B7P3V8	YDR543C	YDR543C	300 nt		-1.85	□□□□□ -2.71
TY4B-P	A0A0B7P3V8	YJL136W-A	YJL136W-A	84 nt		-2.68	□□□□□ -2.84
TY4B-P	A0A0B7P3V8	YJR162C	YJR162C	351 nt		-2.86	□□□□□ -2.87

Retrieved 29 of 7,029 protein–RNA pairs in 6.3 ms