Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm22974-201ENSMUST00000083301 103 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col18a1P39061 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Col18a1P39061 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col18a1P39061 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col18a1P39061 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col18a1P39061 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col18a1P39061 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col18a1P39061 Gm24121-201ENSMUST00000102029 106 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm8475-201ENSMUST00000118211 526 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.74□□□□□ -1.65
Col18a1P39061 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.74□□□□□ -1.65
Col18a1P39061 Gm22843-201ENSMUST00000157710 134 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm25365-201ENSMUST00000158852 121 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm26180-201ENSMUST00000179942 107 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm27521-201ENSMUST00000184022 64 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm25203-202ENSMUST00000200458 216 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm39147-201ENSMUST00000211376 465 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm25203-201ENSMUST00000082842 215 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm22229-201ENSMUST00000082987 108 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col18a1P39061 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Gm44842-201ENSMUST00000209173 3372 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col18a1P39061 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col18a1P39061 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col18a1P39061 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col18a1P39061 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.74□□□□□ -1.65
Col18a1P39061 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col18a1P39061 Gm25213-201ENSMUST00000102388 113 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm24119-201ENSMUST00000103979 246 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm12871-201ENSMUST00000118758 438 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm22433-201ENSMUST00000158550 142 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm26215-201ENSMUST00000158584 139 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm27676-201ENSMUST00000183669 61 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm44634-201ENSMUST00000206119 152 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm30534-201ENSMUST00000217928 207 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm8249-201ENSMUST00000219225 465 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm22358-201ENSMUST00000082877 122 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm25188-201ENSMUST00000083913 122 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col18a1P39061 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col18a1P39061 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col18a1P39061 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col18a1P39061 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.73□□□□□ -1.65
Col18a1P39061 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col18a1P39061 Gm12137-201ENSMUST00000119565 346 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm14792-201ENSMUST00000119725 258 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm23791-201ENSMUST00000122553 293 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm17148-201ENSMUST00000164702 249 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.73□□□□□ -1.65
Col18a1P39061 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 AC155839.1-201ENSMUST00000200105 147 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm44817-201ENSMUST00000205416 453 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm45002-201ENSMUST00000208045 120 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm46234-201ENSMUST00000218702 259 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 AC115291.1-201ENSMUST00000226803 258 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.73□□□□□ -1.65
Col18a1P39061 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col18a1P39061 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col18a1P39061 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.72□□□□□ -1.65
Col18a1P39061 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col18a1P39061 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Col18a1P39061 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col18a1P39061 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col18a1P39061 CT009504.1-201ENSMUST00000218252 3330 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col18a1P39061 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col18a1P39061 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm11898-201ENSMUST00000117161 385 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm14803-201ENSMUST00000117163 361 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm14815-201ENSMUST00000120060 488 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 n-R5s201-201ENSMUST00000122622 116 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm24858-201ENSMUST00000158058 323 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm22765-201ENSMUST00000158371 128 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col18a1P39061 Gm32033-201ENSMUST00000193483 339 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col18a1P39061 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Col18a1P39061 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.72□□□□□ -1.65
Col18a1P39061 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col18a1P39061 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.72□□□□□ -1.65
Col18a1P39061 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col18a1P39061 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.71□□□□□ -1.65
Col18a1P39061 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col18a1P39061 Gm15526-201ENSMUST00000112504 204 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm11693-201ENSMUST00000119625 565 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm14841-201ENSMUST00000121067 758 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 164.9 ms