Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Gm6345-202ENSMUST00000180900 204 ntBASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Gm27389-201ENSMUST00000183622 195 ntBASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Grk6-206ENSMUST00000224995 2971 ntBASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph3bQ9DA80 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Gm17661-201ENSMUST00000170317 270 ntBASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph3bQ9DA80 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph3bQ9DA80 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph3bQ9DA80 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph3bQ9DA80 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph3bQ9DA80 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.83■□□□□ 0.61
Rsph3bQ9DA80 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph3bQ9DA80 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph3bQ9DA80 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Mir8112-201ENSMUST00000184382 131 ntBASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Gm7213-201ENSMUST00000215977 950 ntBASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rsph3bQ9DA80 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Gm21559-201ENSMUST00000220638 855 ntBASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Gm8587-201ENSMUST00000076538 843 ntBASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms