Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Gm29518-201ENSMUST00000190858 372 ntBASIC30.67■■■□□ 2.5
Rtl1Q7M732 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rtl1Q7M732 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Rtl1Q7M732 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rtl1Q7M732 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rtl1Q7M732 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
Rtl1Q7M732 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rtl1Q7M732 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rtl1Q7M732 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Rtl1Q7M732 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Rtl1Q7M732 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC30.66■■■□□ 2.5
Rtl1Q7M732 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rtl1Q7M732 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rtl1Q7M732 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC30.66■■■□□ 2.5
Rtl1Q7M732 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
Rtl1Q7M732 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC30.65■■■□□ 2.5
Rtl1Q7M732 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rtl1Q7M732 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rtl1Q7M732 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rtl1Q7M732 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC30.65■■■□□ 2.5
Rtl1Q7M732 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rtl1Q7M732 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Rtl1Q7M732 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Gm17971-201ENSMUST00000190239 806 ntBASIC30.64■■■□□ 2.5
Rtl1Q7M732 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Rtl1Q7M732 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC30.64■■■□□ 2.5
Rtl1Q7M732 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC30.64■■■□□ 2.5
Rtl1Q7M732 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Rtl1Q7M732 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Rtl1Q7M732 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtl1Q7M732 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Gm37194-201ENSMUST00000193092 3031 ntBASIC30.62■■■□□ 2.49
Rtl1Q7M732 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rtl1Q7M732 Gm11355-201ENSMUST00000121120 306 ntBASIC30.61■■■□□ 2.49
Rtl1Q7M732 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtl1Q7M732 Ank2-226ENSMUST00000189368 339 ntBASIC30.6■■■□□ 2.49
Rtl1Q7M732 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC30.6■■■□□ 2.49
Rtl1Q7M732 AC125350.1-201ENSMUST00000225115 903 ntBASIC30.6■■■□□ 2.49
Rtl1Q7M732 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Rtl1Q7M732 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rtl1Q7M732 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC30.6■■■□□ 2.49
Rtl1Q7M732 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Rtl1Q7M732 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Rtl1Q7M732 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Rtl1Q7M732 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rtl1Q7M732 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC30.59■■■□□ 2.49
Rtl1Q7M732 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rtl1Q7M732 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rtl1Q7M732 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rtl1Q7M732 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Rtl1Q7M732 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Rtl1Q7M732 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC30.59■■■□□ 2.49
Rtl1Q7M732 Gm14859-201ENSMUST00000117752 357 ntBASIC30.59■■■□□ 2.49
Rtl1Q7M732 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC30.58■■■□□ 2.49
Rtl1Q7M732 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Rtl1Q7M732 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rtl1Q7M732 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
Rtl1Q7M732 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rtl1Q7M732 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Rtl1Q7M732 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC30.58■■■□□ 2.49
Rtl1Q7M732 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rtl1Q7M732 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rtl1Q7M732 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Rtl1Q7M732 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
Rtl1Q7M732 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC30.57■■■□□ 2.48
Rtl1Q7M732 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms