Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.65■□□□□ 0.9
Mre11Q61216 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Mre11Q61216 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Mre11Q61216 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mre11Q61216 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mre11Q61216 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mre11Q61216 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.64■□□□□ 0.9
Mre11Q61216 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Mre11Q61216 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mre11Q61216 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mre11Q61216 Gm13146-201ENSMUST00000118508 780 ntBASIC20.64■□□□□ 0.89
Mre11Q61216 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.64■□□□□ 0.89
Mre11Q61216 Gm13534-201ENSMUST00000121169 513 ntBASIC20.64■□□□□ 0.89
Mre11Q61216 Gm27454-201ENSMUST00000185090 204 ntBASIC20.64■□□□□ 0.89
Mre11Q61216 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mre11Q61216 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mre11Q61216 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Mre11Q61216 Gm12821-201ENSMUST00000120022 600 ntBASIC20.63■□□□□ 0.89
Mre11Q61216 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mre11Q61216 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mre11Q61216 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.63■□□□□ 0.89
Mre11Q61216 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mre11Q61216 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mre11Q61216 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mre11Q61216 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
Mre11Q61216 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.62■□□□□ 0.89
Mre11Q61216 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.62■□□□□ 0.89
Mre11Q61216 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Gm43173-201ENSMUST00000202246 593 ntBASIC20.62■□□□□ 0.89
Mre11Q61216 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.62■□□□□ 0.89
Mre11Q61216 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.62■□□□□ 0.89
Mre11Q61216 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.62■□□□□ 0.89
Mre11Q61216 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.62■□□□□ 0.89
Mre11Q61216 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mre11Q61216 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.61■□□□□ 0.89
Mre11Q61216 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Mre11Q61216 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.61■□□□□ 0.89
Mre11Q61216 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Mre11Q61216 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC20.61■□□□□ 0.89
Mre11Q61216 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Mre11Q61216 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.61■□□□□ 0.89
Mre11Q61216 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mre11Q61216 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Mre11Q61216 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mre11Q61216 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms