Protein–RNA interactions for Protein: Q07478

SUB2, ATP-dependent RNA helicase SUB2, yeastyeast

Known RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB2Q07478 tF(GAA)H1tF(GAA)H1 73 nt1.16□□□□□ -2.22
SUB2Q07478 tF(GAA)H2tF(GAA)H2 73 nt1.16□□□□□ -2.22
SUB2Q07478 tF(GAA)MtF(GAA)M 73 nt1.16□□□□□ -2.22
SUB2Q07478 tF(GAA)P1tF(GAA)P1 73 nt1.16□□□□□ -2.22
SUB2Q07478 tF(GAA)P2tF(GAA)P2 73 nt1.16□□□□□ -2.22
SUB2Q07478 YDL247W-AYDL247W-A 75 nt1.15□□□□□ -2.23
SUB2Q07478 YPL060C-AYPL060C-A 3315 nt1.14□□□□□ -2.23
SUB2Q07478 snR69snR69 101 nt1.13□□□□□ -2.23
SUB2Q07478 snR81snR81 201 nt1.13□□□□□ -2.23
SUB2Q07478 DOP1YDR141C 5097 nt1.12□□□□□ -2.23
SUB2Q07478 tD(GUC)QtD(GUC)Q 75 nt1.12□□□□□ -2.23
SUB2Q07478 EMT1tM(CAU)D 73 nt1.11□□□□□ -2.23
SUB2Q07478 EMT5tM(CAU)J1 73 nt1.11□□□□□ -2.23
SUB2Q07478 EMT3tM(CAU)J2 73 nt1.11□□□□□ -2.23
SUB2Q07478 EMT4tM(CAU)M 73 nt1.11□□□□□ -2.23
SUB2Q07478 EMT2tM(CAU)O2 73 nt1.11□□□□□ -2.23
SUB2Q07478 VAM6YDL077C 3150 nt1.11□□□□□ -2.23
SUB2Q07478 BEM2YER155C 6504 nt1.1□□□□□ -2.23
SUB2Q07478 EST1YLR233C 2100 nt1.1□□□□□ -2.23
SUB2Q07478 RPS26AYGL189C 360 nt1.1□□□□□ -2.23
SUB2Q07478 YIL142C-AYIL142C-A 333 nt1.1□□□□□ -2.23
SUB2Q07478 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
SUB2Q07478 YOR192C-BYOR192C-B 5313 nt1.08□□□□□ -2.24
SUB2Q07478 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
SUB2Q07478 IQG1YPL242C 4488 nt1.07□□□□□ -2.24
SUB2Q07478 RDS3YPR094W 324 nt1.07□□□□□ -2.24
SUB2Q07478 YDR371C-AYDR371C-A 105 nt1.05□□□□□ -2.24
SUB2Q07478 YOL083C-AYOL083C-A 141 nt1.04□□□□□ -2.24
SUB2Q07478 YLR286W-AYLR286W-A 135 nt1.03□□□□□ -2.24
SUB2Q07478 YMR160WYMR160W 2451 nt0.99□□□□□ -2.25
SUB2Q07478 MYO1YHR023W 5787 nt0.98□□□□□ -2.25
SUB2Q07478 YOL014WYOL014W 375 nt0.97□□□□□ -2.25
SUB2Q07478 YDL159C-BYDL159C-B 177 nt0.96□□□□□ -2.26
SUB2Q07478 tS(GCU)Q1tS(GCU)Q1 86 nt0.96□□□□□ -2.26
SUB2Q07478 YBL100W-CYBL100W-C 120 nt0.96□□□□□ -2.26
SUB2Q07478 YPR159C-AYPR159C-A 102 nt0.96□□□□□ -2.26
SUB2Q07478 YLR299C-AYLR299C-A 93 nt0.95□□□□□ -2.26
SUB2Q07478 YBL071C-BYBL071C-B 99 nt0.94□□□□□ -2.26
SUB2Q07478 tQ(UUG)QtQ(UUG)Q 76 nt0.92□□□□□ -2.26
SUB2Q07478 ORC3YLL004W 1851 nt0.9□□□□□ -2.26
SUB2Q07478 YNL054W-BYNL054W-B 5250 nt0.9□□□□□ -2.27
SUB2Q07478 snR62snR62 100 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)BtT(AGU)B 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)CtT(AGU)C 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)DtT(AGU)D 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)HtT(AGU)H 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)I1tT(AGU)I1 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)I2tT(AGU)I2 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)JtT(AGU)J 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)N1tT(AGU)N1 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)N2tT(AGU)N2 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)O1tT(AGU)O1 73 nt0.86□□□□□ -2.27
SUB2Q07478 tT(AGU)O2tT(AGU)O2 73 nt0.86□□□□□ -2.27
SUB2Q07478 MLP2YIL149C 5040 nt0.85□□□□□ -2.27
SUB2Q07478 YBL100W-BYBL100W-B 5313 nt0.85□□□□□ -2.27
SUB2Q07478 YOL164W-AYOL164W-A 183 nt0.85□□□□□ -2.27
SUB2Q07478 YOR186C-AYOR186C-A 210 nt0.85□□□□□ -2.27
SUB2Q07478 YKL145W-AYKL145W-A 93 nt0.84□□□□□ -2.27
SUB2Q07478 YGR240C-AYGR240C-A 201 nt0.78□□□□□ -2.28
SUB2Q07478 YER090C-AYER090C-A 90 nt0.76□□□□□ -2.29
SUB2Q07478 YLL066W-BYLL066W-B 171 nt0.72□□□□□ -2.29
SUB2Q07478 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
SUB2Q07478 FMP27YLR454W 7887 nt0.7□□□□□ -2.3
SUB2Q07478 AI1Q0050 2505 nt0.7□□□□□ -2.3
SUB2Q07478 YHR180C-BYHR180C-B 105 nt0.68□□□□□ -2.3
SUB2Q07478 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
SUB2Q07478 snR45snR45 172 nt0.67□□□□□ -2.3
SUB2Q07478 snR47snR47 99 nt0.66□□□□□ -2.3
SUB2Q07478 YDR034C-AYDR034C-A 177 nt0.64□□□□□ -2.31
SUB2Q07478 YML054C-AYML054C-A 159 nt0.63□□□□□ -2.31
SUB2Q07478 snR50snR50 90 nt0.63□□□□□ -2.31
SUB2Q07478 snR67snR67 82 nt0.53□□□□□ -2.32
SUB2Q07478 RPL41AYDL184C 78 nt0.5□□□□□ -2.33
SUB2Q07478 THO2YNL139C 4794 nt0.5□□□□□ -2.33
SUB2Q07478 YBR296C-AYBR296C-A 120 nt0.48□□□□□ -2.33
SUB2Q07478 YER078W-AYER078W-A 165 nt0.45□□□□□ -2.34
SUB2Q07478 YOL013W-AYOL013W-A 192 nt0.45□□□□□ -2.34
SUB2Q07478 YBR109W-AYBR109W-A 225 nt0.45□□□□□ -2.34
SUB2Q07478 ESP1YGR098C 4893 nt0.43□□□□□ -2.34
SUB2Q07478 SOV1YMR066W 2697 nt0.42□□□□□ -2.34
SUB2Q07478 YML100W-AYML100W-A 174 nt0.36□□□□□ -2.35
SUB2Q07478 snR128snR128 126 nt0.34□□□□□ -2.36
SUB2Q07478 YKL225WYKL225W 348 nt0.32□□□□□ -2.36
SUB2Q07478 snR64snR64 101 nt0.25□□□□□ -2.37
SUB2Q07478 snR38snR38 95 nt0.24□□□□□ -2.37
SUB2Q07478 snR53snR53 91 nt0.11□□□□□ -2.39
SUB2Q07478 SKI7YOR076C 2244 nt0.11□□□□□ -2.39
SUB2Q07478 PAU9YBL108C-A 129 nt0.04□□□□□ -2.4
SUB2Q07478 YKL106C-AYKL106C-A 120 nt-0.02□□□□□ -2.41
SUB2Q07478 tA(UGC)QtA(UGC)Q 76 nt-0.12□□□□□ -2.43
SUB2Q07478 SBH2YER019C-A 267 nt-0.13□□□□□ -2.43
SUB2Q07478 YGR122C-AYGR122C-A 129 nt-0.2□□□□□ -2.44
SUB2Q07478 YDL159W-AYDL159W-A 132 nt-0.23□□□□□ -2.45
SUB2Q07478 YJL113WYJL113W 4647 nt-0.25□□□□□ -2.45
SUB2Q07478 YOR376W-AYOR376W-A 156 nt-0.28□□□□□ -2.45
SUB2Q07478 YOR316C-AYOR316C-A 210 nt-0.31□□□□□ -2.46
SUB2Q07478 snR161snR161 161 nt-0.43□□□□□ -2.48
SUB2Q07478 YDL114W-AYDL114W-A 114 nt-0.45□□□□□ -2.48
SUB2Q07478 YLR149C-AYLR149C-A 87 nt-0.48□□□□□ -2.49
SUB2Q07478 YHL009W-BYHL009W-B 5409 nt-0.49□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms