Protein–RNA interactions for Protein: Q06224

YSH1, Endoribonuclease YSH1, yeastyeast

Predicted RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSH1Q06224 PAU12YGR294W 363 nt0.89□□□□□ -2.27
YSH1Q06224 SEC10YLR166C 2616 nt0.88□□□□□ -2.27
YSH1Q06224 snR81snR81 201 nt0.87□□□□□ -2.27
YSH1Q06224 UTP20YBL004W 7482 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)BtF(GAA)B 73 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)FtF(GAA)F 73 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)GtF(GAA)G 73 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)H1tF(GAA)H1 73 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)H2tF(GAA)H2 73 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)MtF(GAA)M 73 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)P1tF(GAA)P1 73 nt0.86□□□□□ -2.27
YSH1Q06224 tF(GAA)P2tF(GAA)P2 73 nt0.86□□□□□ -2.27
YSH1Q06224 CSE1YGL238W 2883 nt0.85□□□□□ -2.27
YSH1Q06224 NIP1YMR309C 2439 nt0.85□□□□□ -2.27
YSH1Q06224 YBR196C-AYBR196C-A 150 nt0.84□□□□□ -2.27
YSH1Q06224 EST1YLR233C 2100 nt0.83□□□□□ -2.28
YSH1Q06224 YAL037C-AYAL037C-A 93 nt0.83□□□□□ -2.28
YSH1Q06224 snR69snR69 101 nt0.8□□□□□ -2.28
YSH1Q06224 RPS26AYGL189C 360 nt0.8□□□□□ -2.28
YSH1Q06224 YMR160WYMR160W 2451 nt0.79□□□□□ -2.28
YSH1Q06224 tD(GUC)QtD(GUC)Q 75 nt0.79□□□□□ -2.28
YSH1Q06224 YDR371C-AYDR371C-A 105 nt0.79□□□□□ -2.28
YSH1Q06224 YOL083C-AYOL083C-A 141 nt0.79□□□□□ -2.28
YSH1Q06224 YMR272W-AYMR272W-A 114 nt0.78□□□□□ -2.28
YSH1Q06224 PET111YMR257C 2403 nt0.77□□□□□ -2.29
YSH1Q06224 LTE1YAL024C 4308 nt0.77□□□□□ -2.29
YSH1Q06224 YDL247W-AYDL247W-A 75 nt0.77□□□□□ -2.29
YSH1Q06224 tS(GCU)Q1tS(GCU)Q1 86 nt0.77□□□□□ -2.29
YSH1Q06224 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
YSH1Q06224 YBL071C-BYBL071C-B 99 nt0.76□□□□□ -2.29
YSH1Q06224 YLR286W-AYLR286W-A 135 nt0.75□□□□□ -2.29
YSH1Q06224 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
YSH1Q06224 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
YSH1Q06224 YNL054W-BYNL054W-B 5250 nt0.72□□□□□ -2.29
YSH1Q06224 ORC3YLL004W 1851 nt0.72□□□□□ -2.29
YSH1Q06224 RDS3YPR094W 324 nt0.71□□□□□ -2.3
YSH1Q06224 YJL077W-AYJL077W-A 87 nt0.7□□□□□ -2.3
YSH1Q06224 YOL014WYOL014W 375 nt0.7□□□□□ -2.3
YSH1Q06224 YKL145W-AYKL145W-A 93 nt0.68□□□□□ -2.3
YSH1Q06224 YDL159C-BYDL159C-B 177 nt0.67□□□□□ -2.3
YSH1Q06224 YLR299C-AYLR299C-A 93 nt0.66□□□□□ -2.3
YSH1Q06224 YOL164W-AYOL164W-A 183 nt0.66□□□□□ -2.3
YSH1Q06224 tQ(UUG)QtQ(UUG)Q 76 nt0.64□□□□□ -2.31
YSH1Q06224 YBL100W-BYBL100W-B 5313 nt0.64□□□□□ -2.31
YSH1Q06224 snR62snR62 100 nt0.62□□□□□ -2.31
YSH1Q06224 YLL066W-BYLL066W-B 171 nt0.61□□□□□ -2.31
YSH1Q06224 snR45snR45 172 nt0.6□□□□□ -2.31
YSH1Q06224 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
YSH1Q06224 MLP1YKR095W 5628 nt0.57□□□□□ -2.32
YSH1Q06224 YGR240C-AYGR240C-A 201 nt0.56□□□□□ -2.32
YSH1Q06224 YBL100W-CYBL100W-C 120 nt0.56□□□□□ -2.32
YSH1Q06224 FMP27YLR454W 7887 nt0.55□□□□□ -2.32
YSH1Q06224 YER090C-AYER090C-A 90 nt0.54□□□□□ -2.32
YSH1Q06224 snR47snR47 99 nt0.53□□□□□ -2.32
YSH1Q06224 YDR034C-AYDR034C-A 177 nt0.52□□□□□ -2.33
YSH1Q06224 snR50snR50 90 nt0.52□□□□□ -2.33
YSH1Q06224 AI1Q0050 2505 nt0.51□□□□□ -2.33
YSH1Q06224 YML054C-AYML054C-A 159 nt0.5□□□□□ -2.33
YSH1Q06224 YHR180C-BYHR180C-B 105 nt0.47□□□□□ -2.33
YSH1Q06224 YOR186C-AYOR186C-A 210 nt0.46□□□□□ -2.34
YSH1Q06224 IQG1YPL242C 4488 nt0.43□□□□□ -2.34
YSH1Q06224 ESP1YGR098C 4893 nt0.41□□□□□ -2.34
YSH1Q06224 YBR109W-AYBR109W-A 225 nt0.4□□□□□ -2.35
YSH1Q06224 SOV1YMR066W 2697 nt0.37□□□□□ -2.35
YSH1Q06224 RPL41AYDL184C 78 nt0.35□□□□□ -2.35
YSH1Q06224 MLP2YIL149C 5040 nt0.34□□□□□ -2.35
YSH1Q06224 snR67snR67 82 nt0.33□□□□□ -2.36
YSH1Q06224 YER078W-AYER078W-A 165 nt0.33□□□□□ -2.36
YSH1Q06224 YBR296C-AYBR296C-A 120 nt0.33□□□□□ -2.36
YSH1Q06224 THO2YNL139C 4794 nt0.33□□□□□ -2.36
YSH1Q06224 snR38snR38 95 nt0.32□□□□□ -2.36
YSH1Q06224 YKL225WYKL225W 348 nt0.29□□□□□ -2.36
YSH1Q06224 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
YSH1Q06224 YML100W-AYML100W-A 174 nt0.27□□□□□ -2.37
YSH1Q06224 snR64snR64 101 nt0.23□□□□□ -2.37
YSH1Q06224 snR128snR128 126 nt0.21□□□□□ -2.38
YSH1Q06224 SKI7YOR076C 2244 nt0.17□□□□□ -2.38
YSH1Q06224 snR53snR53 91 nt0.11□□□□□ -2.39
YSH1Q06224 YDL159W-AYDL159W-A 132 nt0.04□□□□□ -2.4
YSH1Q06224 PAU9YBL108C-A 129 nt0.03□□□□□ -2.4
YSH1Q06224 YKL106C-AYKL106C-A 120 nt-0.02□□□□□ -2.41
YSH1Q06224 tA(UGC)QtA(UGC)Q 76 nt-0.08□□□□□ -2.42
YSH1Q06224 YGR122C-AYGR122C-A 129 nt-0.08□□□□□ -2.42
YSH1Q06224 YOR376W-AYOR376W-A 156 nt-0.09□□□□□ -2.42
YSH1Q06224 SBH2YER019C-A 267 nt-0.15□□□□□ -2.43
YSH1Q06224 YLR149C-AYLR149C-A 87 nt-0.21□□□□□ -2.44
YSH1Q06224 YOR316C-AYOR316C-A 210 nt-0.22□□□□□ -2.44
YSH1Q06224 YDL114W-AYDL114W-A 114 nt-0.27□□□□□ -2.45
YSH1Q06224 snR161snR161 161 nt-0.29□□□□□ -2.46
YSH1Q06224 tV(UAC)QtV(UAC)Q 76 nt-0.3□□□□□ -2.46
YSH1Q06224 snR77snR77 88 nt-0.35□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 1267.9 ms