Protein–RNA interactions for Protein: Q03782

SNU56, 56 kDa U1 small nuclear ribonucleoprotein component, yeastyeast

Known RBP Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNU56Q03782 YMR326CYMR326C 309 nt0.79□□□□□ -2.28
SNU56Q03782 BUL2YML111W 2763 nt0.78□□□□□ -2.28
SNU56Q03782 YPL060C-AYPL060C-A 3315 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
SNU56Q03782 tT(AGU)O2tT(AGU)O2 73 nt0.77□□□□□ -2.29
SNU56Q03782 YBR178WYBR178W 375 nt0.77□□□□□ -2.29
SNU56Q03782 NIP1YMR309C 2439 nt0.75□□□□□ -2.29
SNU56Q03782 UTP20YBL004W 7482 nt0.75□□□□□ -2.29
SNU56Q03782 CSE1YGL238W 2883 nt0.75□□□□□ -2.29
SNU56Q03782 SEC10YLR166C 2616 nt0.74□□□□□ -2.29
SNU56Q03782 YOR192C-BYOR192C-B 5313 nt0.74□□□□□ -2.29
SNU56Q03782 YMR160WYMR160W 2451 nt0.74□□□□□ -2.29
SNU56Q03782 LTE1YAL024C 4308 nt0.73□□□□□ -2.29
SNU56Q03782 YGL041C-BYGL041C-B 183 nt0.73□□□□□ -2.29
SNU56Q03782 SBH1YER087C-B 249 nt0.72□□□□□ -2.29
SNU56Q03782 YHR217CYHR217C 462 nt0.72□□□□□ -2.29
SNU56Q03782 PET111YMR257C 2403 nt0.7□□□□□ -2.3
SNU56Q03782 RPS26AYGL189C 360 nt0.7□□□□□ -2.3
SNU56Q03782 YDR371C-AYDR371C-A 105 nt0.69□□□□□ -2.3
SNU56Q03782 YBR196C-AYBR196C-A 150 nt0.69□□□□□ -2.3
SNU56Q03782 EST1YLR233C 2100 nt0.68□□□□□ -2.3
SNU56Q03782 snR69snR69 101 nt0.67□□□□□ -2.3
SNU56Q03782 snR81snR81 201 nt0.66□□□□□ -2.3
SNU56Q03782 YKL145W-AYKL145W-A 93 nt0.66□□□□□ -2.3
SNU56Q03782 tD(GUC)QtD(GUC)Q 75 nt0.65□□□□□ -2.31
SNU56Q03782 YAL037C-AYAL037C-A 93 nt0.65□□□□□ -2.31
SNU56Q03782 YOL014WYOL014W 375 nt0.65□□□□□ -2.31
SNU56Q03782 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
SNU56Q03782 YJL077W-AYJL077W-A 87 nt0.62□□□□□ -2.31
SNU56Q03782 YPR159C-AYPR159C-A 102 nt0.62□□□□□ -2.31
SNU56Q03782 ORC3YLL004W 1851 nt0.62□□□□□ -2.31
SNU56Q03782 YLR286W-AYLR286W-A 135 nt0.6□□□□□ -2.31
SNU56Q03782 RDS3YPR094W 324 nt0.6□□□□□ -2.31
SNU56Q03782 YOL083C-AYOL083C-A 141 nt0.59□□□□□ -2.31
SNU56Q03782 MLP1YKR095W 5628 nt0.58□□□□□ -2.32
SNU56Q03782 YBL071C-BYBL071C-B 99 nt0.57□□□□□ -2.32
SNU56Q03782 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
SNU56Q03782 FMP27YLR454W 7887 nt0.57□□□□□ -2.32
SNU56Q03782 YBL100W-BYBL100W-B 5313 nt0.55□□□□□ -2.32
SNU56Q03782 YDL159C-BYDL159C-B 177 nt0.54□□□□□ -2.32
SNU56Q03782 tS(GCU)Q1tS(GCU)Q1 86 nt0.54□□□□□ -2.32
SNU56Q03782 MYO1YHR023W 5787 nt0.53□□□□□ -2.32
SNU56Q03782 YLR299C-AYLR299C-A 93 nt0.52□□□□□ -2.33
SNU56Q03782 YDL247W-AYDL247W-A 75 nt0.51□□□□□ -2.33
SNU56Q03782 tQ(UUG)QtQ(UUG)Q 76 nt0.51□□□□□ -2.33
SNU56Q03782 YNL054W-BYNL054W-B 5250 nt0.5□□□□□ -2.33
SNU56Q03782 IQG1YPL242C 4488 nt0.5□□□□□ -2.33
SNU56Q03782 YOL164W-AYOL164W-A 183 nt0.48□□□□□ -2.33
SNU56Q03782 snR62snR62 100 nt0.44□□□□□ -2.34
SNU56Q03782 YER090C-AYER090C-A 90 nt0.44□□□□□ -2.34
SNU56Q03782 YOR186C-AYOR186C-A 210 nt0.44□□□□□ -2.34
SNU56Q03782 AI1Q0050 2505 nt0.42□□□□□ -2.34
SNU56Q03782 YBL100W-CYBL100W-C 120 nt0.42□□□□□ -2.34
SNU56Q03782 YGR240C-AYGR240C-A 201 nt0.4□□□□□ -2.35
SNU56Q03782 snR50snR50 90 nt0.39□□□□□ -2.35
SNU56Q03782 THO2YNL139C 4794 nt0.38□□□□□ -2.35
SNU56Q03782 YLL066W-BYLL066W-B 171 nt0.36□□□□□ -2.35
SNU56Q03782 MLP2YIL149C 5040 nt0.36□□□□□ -2.35
SNU56Q03782 YML054C-AYML054C-A 159 nt0.35□□□□□ -2.35
SNU56Q03782 snR45snR45 172 nt0.35□□□□□ -2.35
SNU56Q03782 snR47snR47 99 nt0.35□□□□□ -2.35
SNU56Q03782 YHR180C-BYHR180C-B 105 nt0.33□□□□□ -2.36
SNU56Q03782 YDR034C-AYDR034C-A 177 nt0.32□□□□□ -2.36
SNU56Q03782 SOV1YMR066W 2697 nt0.31□□□□□ -2.36
SNU56Q03782 ESP1YGR098C 4893 nt0.3□□□□□ -2.36
SNU56Q03782 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
SNU56Q03782 YBR109W-AYBR109W-A 225 nt0.26□□□□□ -2.37
SNU56Q03782 snR67snR67 82 nt0.25□□□□□ -2.37
SNU56Q03782 YER078W-AYER078W-A 165 nt0.25□□□□□ -2.37
SNU56Q03782 RPL41AYDL184C 78 nt0.22□□□□□ -2.37
SNU56Q03782 YML100W-AYML100W-A 174 nt0.22□□□□□ -2.37
SNU56Q03782 YBR296C-AYBR296C-A 120 nt0.21□□□□□ -2.38
SNU56Q03782 snR128snR128 126 nt0.17□□□□□ -2.38
SNU56Q03782 snR38snR38 95 nt0.17□□□□□ -2.38
SNU56Q03782 YKL225WYKL225W 348 nt0.14□□□□□ -2.39
SNU56Q03782 SKI7YOR076C 2244 nt0.08□□□□□ -2.4
SNU56Q03782 snR64snR64 101 nt0.07□□□□□ -2.4
SNU56Q03782 PAU9YBL108C-A 129 nt-0.03□□□□□ -2.41
SNU56Q03782 snR53snR53 91 nt-0.04□□□□□ -2.42
SNU56Q03782 tA(UGC)QtA(UGC)Q 76 nt-0.09□□□□□ -2.42
SNU56Q03782 YKL106C-AYKL106C-A 120 nt-0.1□□□□□ -2.43
SNU56Q03782 YJL113WYJL113W 4647 nt-0.11□□□□□ -2.43
SNU56Q03782 YDL159W-AYDL159W-A 132 nt-0.14□□□□□ -2.43
SNU56Q03782 SBH2YER019C-A 267 nt-0.14□□□□□ -2.43
SNU56Q03782 YOR376W-AYOR376W-A 156 nt-0.17□□□□□ -2.44
SNU56Q03782 YGR122C-AYGR122C-A 129 nt-0.21□□□□□ -2.44
SNU56Q03782 YOR316C-AYOR316C-A 210 nt-0.26□□□□□ -2.45
SNU56Q03782 snR161snR161 161 nt-0.33□□□□□ -2.46
SNU56Q03782 YDL114W-AYDL114W-A 114 nt-0.36□□□□□ -2.47
SNU56Q03782 YLR149C-AYLR149C-A 87 nt-0.36□□□□□ -2.47
SNU56Q03782 URB1YKL014C 5295 nt-0.37□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms