Protein–RNA interactions for Protein: P53688

HST4, NAD-dependent histone deacetylase HST4, yeastyeast

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HST4P53688 YNL067W-BYNL067W-B 141 nt0.18□□□□□ -2.38
HST4P53688 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
HST4P53688 YNL054W-BYNL054W-B 5250 nt0.18□□□□□ -2.38
HST4P53688 YGR146C-AYGR146C-A 162 nt0.17□□□□□ -2.38
HST4P53688 YKL145W-AYKL145W-A 93 nt0.17□□□□□ -2.38
HST4P53688 EST1YLR233C 2100 nt0.16□□□□□ -2.38
HST4P53688 YGL007C-AYGL007C-A 87 nt0.15□□□□□ -2.39
HST4P53688 AI1Q0050 2505 nt0.14□□□□□ -2.39
HST4P53688 Q0032Q0032 291 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)BtF(GAA)B 73 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)FtF(GAA)F 73 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)GtF(GAA)G 73 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)H1tF(GAA)H1 73 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)H2tF(GAA)H2 73 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)MtF(GAA)M 73 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)P1tF(GAA)P1 73 nt0.14□□□□□ -2.39
HST4P53688 tF(GAA)P2tF(GAA)P2 73 nt0.14□□□□□ -2.39
HST4P53688 snR69snR69 101 nt0.11□□□□□ -2.39
HST4P53688 SOV1YMR066W 2697 nt0.1□□□□□ -2.39
HST4P53688 YOR225WYOR225W 330 nt0.1□□□□□ -2.39
HST4P53688 ESP1YGR098C 4893 nt0.09□□□□□ -2.4
HST4P53688 PMP2YEL017C-A 132 nt0.08□□□□□ -2.4
HST4P53688 YNL205CYNL205C 423 nt0.07□□□□□ -2.4
HST4P53688 YJL077W-AYJL077W-A 87 nt0.06□□□□□ -2.4
HST4P53688 RPM2YML091C 3609 nt0.06□□□□□ -2.4
HST4P53688 YGR164WYGR164W 336 nt0.05□□□□□ -2.4
HST4P53688 tQ(UUG)QtQ(UUG)Q 76 nt0.05□□□□□ -2.4
HST4P53688 YLR294CYLR294C 330 nt0.05□□□□□ -2.4
HST4P53688 SOM1YEL059C-A 225 nt0.03□□□□□ -2.4
HST4P53688 SEC10YLR166C 2616 nt0.02□□□□□ -2.41
HST4P53688 snR128snR128 126 nt0.02□□□□□ -2.41
HST4P53688 RDS3YPR094W 324 nt0.02□□□□□ -2.41
HST4P53688 YBR178WYBR178W 375 nt0.02□□□□□ -2.41
HST4P53688 YPL060C-AYPL060C-A 3315 nt0.02□□□□□ -2.41
HST4P53688 YIL071W-AYIL071W-A 477 nt0.01□□□□□ -2.41
HST4P53688 THO2YNL139C 4794 nt0.01□□□□□ -2.41
HST4P53688 tD(GUC)QtD(GUC)Q 75 nt-0.01□□□□□ -2.41
HST4P53688 YNL266WYNL266W 420 nt-0.01□□□□□ -2.41
HST4P53688 YOL014WYOL014W 375 nt-0.01□□□□□ -2.41
HST4P53688 YCL001W-BYCL001W-B 255 nt-0.02□□□□□ -2.41
HST4P53688 YCR095W-AYCR095W-A 159 nt-0.05□□□□□ -2.42
HST4P53688 snR50snR50 90 nt-0.05□□□□□ -2.42
HST4P53688 YBR196C-AYBR196C-A 150 nt-0.06□□□□□ -2.42
HST4P53688 YLR286W-AYLR286W-A 135 nt-0.07□□□□□ -2.42
HST4P53688 YER078W-AYER078W-A 165 nt-0.08□□□□□ -2.42
HST4P53688 YER090C-AYER090C-A 90 nt-0.08□□□□□ -2.42
HST4P53688 YDL159C-BYDL159C-B 177 nt-0.09□□□□□ -2.42
HST4P53688 YML100W-AYML100W-A 174 nt-0.11□□□□□ -2.43
HST4P53688 snR45snR45 172 nt-0.14□□□□□ -2.43
HST4P53688 YLR299C-AYLR299C-A 93 nt-0.15□□□□□ -2.43
HST4P53688 YNL170WYNL170W 396 nt-0.2□□□□□ -2.44
HST4P53688 PAU9YBL108C-A 129 nt-0.2□□□□□ -2.44
HST4P53688 snR67snR67 82 nt-0.21□□□□□ -2.44
HST4P53688 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
HST4P53688 ATP8Q0080 147 nt-0.25□□□□□ -2.45
HST4P53688 YML054C-AYML054C-A 159 nt-0.25□□□□□ -2.45
HST4P53688 YOL083C-AYOL083C-A 141 nt-0.26□□□□□ -2.45
HST4P53688 tA(UGC)QtA(UGC)Q 76 nt-0.29□□□□□ -2.46
HST4P53688 YBL071C-BYBL071C-B 99 nt-0.31□□□□□ -2.46
HST4P53688 SKI7YOR076C 2244 nt-0.33□□□□□ -2.46
HST4P53688 YHR180C-BYHR180C-B 105 nt-0.33□□□□□ -2.46
HST4P53688 snR81snR81 201 nt-0.35□□□□□ -2.47
HST4P53688 Q0092Q0092 141 nt-0.35□□□□□ -2.47
HST4P53688 YAL037C-AYAL037C-A 93 nt-0.35□□□□□ -2.47
HST4P53688 YNL103W-AYNL103W-A 90 nt-0.36□□□□□ -2.47
HST4P53688 TFB5YDR079C-A 219 nt-0.37□□□□□ -2.47
HST4P53688 YGL041C-BYGL041C-B 183 nt-0.41□□□□□ -2.48
HST4P53688 YOL164W-AYOL164W-A 183 nt-0.41□□□□□ -2.48
HST4P53688 snR61snR61 90 nt-0.44□□□□□ -2.48
HST4P53688 snR47snR47 99 nt-0.46□□□□□ -2.48
HST4P53688 YBR109W-AYBR109W-A 225 nt-0.47□□□□□ -2.48
HST4P53688 YBL100W-CYBL100W-C 120 nt-0.48□□□□□ -2.49
HST4P53688 RPL41AYDL184C 78 nt-0.49□□□□□ -2.49
HST4P53688 YGR240C-AYGR240C-A 201 nt-0.49□□□□□ -2.49
HST4P53688 YBR296C-AYBR296C-A 120 nt-0.5□□□□□ -2.49
HST4P53688 snR161snR161 161 nt-0.51□□□□□ -2.49
HST4P53688 URB1YKL014C 5295 nt-0.53□□□□□ -2.49
HST4P53688 snR38snR38 95 nt-0.54□□□□□ -2.5
HST4P53688 Q0143Q0143 153 nt-0.55□□□□□ -2.5
HST4P53688 tS(GCU)Q1tS(GCU)Q1 86 nt-0.57□□□□□ -2.5
HST4P53688 YJL113WYJL113W 4647 nt-0.57□□□□□ -2.5
HST4P53688 YOR376W-AYOR376W-A 156 nt-0.59□□□□□ -2.5
HST4P53688 YKL106C-AYKL106C-A 120 nt-0.61□□□□□ -2.51
HST4P53688 snR33snR33 183 nt-0.62□□□□□ -2.51
HST4P53688 snR62snR62 100 nt-0.67□□□□□ -2.52
HST4P53688 YDR034C-AYDR034C-A 177 nt-0.67□□□□□ -2.52
HST4P53688 YKL225WYKL225W 348 nt-0.69□□□□□ -2.52
HST4P53688 snR85snR85 171 nt-0.7□□□□□ -2.52
HST4P53688 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
HST4P53688 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
HST4P53688 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
HST4P53688 YHL009W-BYHL009W-B 5409 nt-0.74□□□□□ -2.53
HST4P53688 YMR326CYMR326C 309 nt-0.75□□□□□ -2.53
HST4P53688 YOR316C-AYOR316C-A 210 nt-0.75□□□□□ -2.53
HST4P53688 YHR217CYHR217C 462 nt-0.76□□□□□ -2.53
HST4P53688 YBL109WYBL109W 336 nt-0.78□□□□□ -2.53
HST4P53688 snR77snR77 88 nt-0.8□□□□□ -2.54
HST4P53688 tP(UGG)QtP(UGG)Q 72 nt-0.8□□□□□ -2.54
HST4P53688 CDC65tQ(CUG)M 72 nt-0.85□□□□□ -2.55
HST4P53688 snR64snR64 101 nt-0.9□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 88 ms