Protein–RNA interactions for Protein: P52492

UBC11, Ubiquitin-conjugating enzyme E2-18 kDa, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBC11P52492 VAM6YDL077C 3150 nt0.87□□□□□ -2.27
UBC11P52492 SIP4YJL089W 2490 nt0.87□□□□□ -2.27
UBC11P52492 YDL159C-BYDL159C-B 177 nt0.87□□□□□ -2.27
UBC11P52492 YGR240C-AYGR240C-A 201 nt0.86□□□□□ -2.27
UBC11P52492 YJL077W-AYJL077W-A 87 nt0.86□□□□□ -2.27
UBC11P52492 YLR299C-AYLR299C-A 93 nt0.86□□□□□ -2.27
UBC11P52492 YDR034C-AYDR034C-A 177 nt0.85□□□□□ -2.27
UBC11P52492 EMT1tM(CAU)D 73 nt0.85□□□□□ -2.27
UBC11P52492 EMT5tM(CAU)J1 73 nt0.85□□□□□ -2.27
UBC11P52492 EMT3tM(CAU)J2 73 nt0.85□□□□□ -2.27
UBC11P52492 EMT4tM(CAU)M 73 nt0.85□□□□□ -2.27
UBC11P52492 EMT2tM(CAU)O2 73 nt0.85□□□□□ -2.27
UBC11P52492 PAU12YGR294W 363 nt0.84□□□□□ -2.27
UBC11P52492 tH(GUG)E1tH(GUG)E1 72 nt0.83□□□□□ -2.28
UBC11P52492 tH(GUG)E2tH(GUG)E2 72 nt0.83□□□□□ -2.28
UBC11P52492 tH(GUG)G1tH(GUG)G1 72 nt0.83□□□□□ -2.28
UBC11P52492 tH(GUG)G2tH(GUG)G2 72 nt0.83□□□□□ -2.28
UBC11P52492 tH(GUG)HtH(GUG)H 72 nt0.83□□□□□ -2.28
UBC11P52492 tH(GUG)KtH(GUG)K 72 nt0.83□□□□□ -2.28
UBC11P52492 tH(GUG)MtH(GUG)M 72 nt0.83□□□□□ -2.28
UBC11P52492 PET111YMR257C 2403 nt0.83□□□□□ -2.28
UBC11P52492 snR47snR47 99 nt0.82□□□□□ -2.28
UBC11P52492 YPL060C-AYPL060C-A 3315 nt0.82□□□□□ -2.28
UBC11P52492 YDR371C-AYDR371C-A 105 nt0.81□□□□□ -2.28
UBC11P52492 tQ(UUG)QtQ(UUG)Q 76 nt0.8□□□□□ -2.28
UBC11P52492 DOP1YDR141C 5097 nt0.79□□□□□ -2.28
UBC11P52492 PAU24YBR301W 363 nt0.78□□□□□ -2.28
UBC11P52492 BEM2YER155C 6504 nt0.77□□□□□ -2.29
UBC11P52492 tV(UAC)BtV(UAC)B 74 nt0.75□□□□□ -2.29
UBC11P52492 tV(UAC)DtV(UAC)D 74 nt0.75□□□□□ -2.29
UBC11P52492 ORC3YLL004W 1851 nt0.75□□□□□ -2.29
UBC11P52492 LTE1YAL024C 4308 nt0.73□□□□□ -2.29
UBC11P52492 YML054C-AYML054C-A 159 nt0.71□□□□□ -2.3
UBC11P52492 YHR180C-BYHR180C-B 105 nt0.69□□□□□ -2.3
UBC11P52492 IML1YJR138W 4755 nt0.68□□□□□ -2.3
UBC11P52492 YNL054W-BYNL054W-B 5250 nt0.67□□□□□ -2.3
UBC11P52492 YER090C-AYER090C-A 90 nt0.66□□□□□ -2.3
UBC11P52492 snR50snR50 90 nt0.66□□□□□ -2.3
UBC11P52492 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
UBC11P52492 YBL100W-BYBL100W-B 5313 nt0.63□□□□□ -2.31
UBC11P52492 MLP1YKR095W 5628 nt0.62□□□□□ -2.31
UBC11P52492 AI1Q0050 2505 nt0.62□□□□□ -2.31
UBC11P52492 YBR109W-AYBR109W-A 225 nt0.61□□□□□ -2.31
UBC11P52492 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
UBC11P52492 RPL41AYDL184C 78 nt0.6□□□□□ -2.31
UBC11P52492 YMR272W-AYMR272W-A 114 nt0.57□□□□□ -2.32
UBC11P52492 YBR296C-AYBR296C-A 120 nt0.57□□□□□ -2.32
UBC11P52492 YKL225WYKL225W 348 nt0.56□□□□□ -2.32
UBC11P52492 snR64snR64 101 nt0.55□□□□□ -2.32
UBC11P52492 YMR160WYMR160W 2451 nt0.54□□□□□ -2.32
UBC11P52492 YOR186C-AYOR186C-A 210 nt0.53□□□□□ -2.32
UBC11P52492 snR38snR38 95 nt0.52□□□□□ -2.33
UBC11P52492 snR67snR67 82 nt0.51□□□□□ -2.33
UBC11P52492 snR53snR53 91 nt0.48□□□□□ -2.33
UBC11P52492 tT(AGU)BtT(AGU)B 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)CtT(AGU)C 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)DtT(AGU)D 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)HtT(AGU)H 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)I1tT(AGU)I1 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)I2tT(AGU)I2 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)JtT(AGU)J 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)N1tT(AGU)N1 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)N2tT(AGU)N2 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)O1tT(AGU)O1 73 nt0.44□□□□□ -2.34
UBC11P52492 tT(AGU)O2tT(AGU)O2 73 nt0.44□□□□□ -2.34
UBC11P52492 IQG1YPL242C 4488 nt0.42□□□□□ -2.34
UBC11P52492 SOV1YMR066W 2697 nt0.35□□□□□ -2.35
UBC11P52492 MLP2YIL149C 5040 nt0.35□□□□□ -2.35
UBC11P52492 SKI7YOR076C 2244 nt0.34□□□□□ -2.35
UBC11P52492 YML100W-AYML100W-A 174 nt0.34□□□□□ -2.36
UBC11P52492 YDL159W-AYDL159W-A 132 nt0.31□□□□□ -2.36
UBC11P52492 YOL013W-AYOL013W-A 192 nt0.29□□□□□ -2.36
UBC11P52492 THO2YNL139C 4794 nt0.29□□□□□ -2.36
UBC11P52492 FMP27YLR454W 7887 nt0.27□□□□□ -2.37
UBC11P52492 snR128snR128 126 nt0.27□□□□□ -2.37
UBC11P52492 UTP20YBL004W 7482 nt0.26□□□□□ -2.37
UBC11P52492 YGR122C-AYGR122C-A 129 nt0.23□□□□□ -2.37
UBC11P52492 ESP1YGR098C 4893 nt0.22□□□□□ -2.37
UBC11P52492 YKL106C-AYKL106C-A 120 nt0.2□□□□□ -2.38
UBC11P52492 YKL145W-AYKL145W-A 93 nt0.19□□□□□ -2.38
UBC11P52492 tF(GAA)BtF(GAA)B 73 nt0.15□□□□□ -2.39
UBC11P52492 tF(GAA)FtF(GAA)F 73 nt0.15□□□□□ -2.39
UBC11P52492 tF(GAA)GtF(GAA)G 73 nt0.15□□□□□ -2.39
UBC11P52492 tF(GAA)H1tF(GAA)H1 73 nt0.15□□□□□ -2.39
UBC11P52492 tF(GAA)H2tF(GAA)H2 73 nt0.15□□□□□ -2.39
UBC11P52492 tF(GAA)MtF(GAA)M 73 nt0.15□□□□□ -2.39
UBC11P52492 tF(GAA)P1tF(GAA)P1 73 nt0.15□□□□□ -2.39
UBC11P52492 tF(GAA)P2tF(GAA)P2 73 nt0.15□□□□□ -2.39
UBC11P52492 PAU9YBL108C-A 129 nt0.15□□□□□ -2.39
UBC11P52492 YLR149C-AYLR149C-A 87 nt0.11□□□□□ -2.39
UBC11P52492 YOR376W-AYOR376W-A 156 nt0.06□□□□□ -2.4
UBC11P52492 YOL014WYOL014W 375 nt0.05□□□□□ -2.4
UBC11P52492 YDL114W-AYDL114W-A 114 nt-0.02□□□□□ -2.41
UBC11P52492 tA(UGC)QtA(UGC)Q 76 nt-0.02□□□□□ -2.41
UBC11P52492 YER078W-AYER078W-A 165 nt-0.02□□□□□ -2.41
UBC11P52492 YOR316C-AYOR316C-A 210 nt-0.05□□□□□ -2.42
UBC11P52492 YKL096C-BYKL096C-B 150 nt-0.06□□□□□ -2.42
UBC11P52492 SBH2YER019C-A 267 nt-0.1□□□□□ -2.43
UBC11P52492 tV(UAC)QtV(UAC)Q 76 nt-0.1□□□□□ -2.43
UBC11P52492 snR77snR77 88 nt-0.16□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms