Protein–RNA interactions for Protein: P40344

ATG3, Autophagy-related protein 3, yeastyeast

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG3P40344 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
ATG3P40344 YNL054W-BYNL054W-B 5250 nt1.52□□□□□ -2.17
ATG3P40344 NIP1YMR309C 2439 nt1.51□□□□□ -2.17
ATG3P40344 YKL225WYKL225W 348 nt1.47□□□□□ -2.17
ATG3P40344 PAU12YGR294W 363 nt1.46□□□□□ -2.18
ATG3P40344 NUP192YJL039C 5052 nt1.46□□□□□ -2.18
ATG3P40344 RKR1YMR247C 4689 nt1.46□□□□□ -2.18
ATG3P40344 YBR109W-AYBR109W-A 225 nt1.45□□□□□ -2.18
ATG3P40344 YJL077W-AYJL077W-A 87 nt1.44□□□□□ -2.18
ATG3P40344 YML054C-AYML054C-A 159 nt1.44□□□□□ -2.18
ATG3P40344 SIP4YJL089W 2490 nt1.43□□□□□ -2.18
ATG3P40344 YHR180C-BYHR180C-B 105 nt1.4□□□□□ -2.19
ATG3P40344 snR38snR38 95 nt1.38□□□□□ -2.19
ATG3P40344 YPR117WYPR117W 7470 nt1.38□□□□□ -2.19
ATG3P40344 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
ATG3P40344 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
ATG3P40344 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
ATG3P40344 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
ATG3P40344 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
ATG3P40344 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
ATG3P40344 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
ATG3P40344 snR50snR50 90 nt1.36□□□□□ -2.19
ATG3P40344 YOR192C-BYOR192C-B 5313 nt1.35□□□□□ -2.19
ATG3P40344 RPL41AYDL184C 78 nt1.34□□□□□ -2.19
ATG3P40344 AI1Q0050 2505 nt1.34□□□□□ -2.2
ATG3P40344 tQ(UUG)QtQ(UUG)Q 76 nt1.32□□□□□ -2.2
ATG3P40344 YBR296C-AYBR296C-A 120 nt1.32□□□□□ -2.2
ATG3P40344 YDR371C-AYDR371C-A 105 nt1.26□□□□□ -2.21
ATG3P40344 YER090C-AYER090C-A 90 nt1.25□□□□□ -2.21
ATG3P40344 SCC2YDR180W 4482 nt1.24□□□□□ -2.21
ATG3P40344 YDL159W-AYDL159W-A 132 nt1.23□□□□□ -2.21
ATG3P40344 BEM2YER155C 6504 nt1.21□□□□□ -2.22
ATG3P40344 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
ATG3P40344 YJR029WYJR029W 5268 nt1.2□□□□□ -2.22
ATG3P40344 YPR137C-BYPR137C-B 5268 nt1.2□□□□□ -2.22
ATG3P40344 YLR149C-AYLR149C-A 87 nt1.17□□□□□ -2.22
ATG3P40344 PAU24YBR301W 363 nt1.14□□□□□ -2.23
ATG3P40344 PET111YMR257C 2403 nt1.13□□□□□ -2.23
ATG3P40344 SKI7YOR076C 2244 nt1.13□□□□□ -2.23
ATG3P40344 YBL100W-BYBL100W-B 5313 nt1.11□□□□□ -2.23
ATG3P40344 DOP1YDR141C 5097 nt1.11□□□□□ -2.23
ATG3P40344 LTE1YAL024C 4308 nt1.09□□□□□ -2.23
ATG3P40344 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
ATG3P40344 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
ATG3P40344 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
ATG3P40344 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
ATG3P40344 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
ATG3P40344 tV(UAC)BtV(UAC)B 74 nt1.07□□□□□ -2.24
ATG3P40344 tV(UAC)DtV(UAC)D 74 nt1.07□□□□□ -2.24
ATG3P40344 IML1YJR138W 4755 nt1.07□□□□□ -2.24
ATG3P40344 YGR122C-AYGR122C-A 129 nt1.04□□□□□ -2.24
ATG3P40344 YMR160WYMR160W 2451 nt1.01□□□□□ -2.25
ATG3P40344 snR67snR67 82 nt1□□□□□ -2.25
ATG3P40344 YKL096C-BYKL096C-B 150 nt0.99□□□□□ -2.25
ATG3P40344 MLP1YKR095W 5628 nt0.86□□□□□ -2.27
ATG3P40344 IQG1YPL242C 4488 nt0.79□□□□□ -2.28
ATG3P40344 YOR186C-AYOR186C-A 210 nt0.74□□□□□ -2.29
ATG3P40344 MLP2YIL149C 5040 nt0.73□□□□□ -2.29
ATG3P40344 snR75snR75 89 nt0.73□□□□□ -2.29
ATG3P40344 YER078W-AYER078W-A 165 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
ATG3P40344 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
ATG3P40344 YML100W-AYML100W-A 174 nt0.73□□□□□ -2.29
ATG3P40344 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
ATG3P40344 UTP10YJL109C 5310 nt0.72□□□□□ -2.29
ATG3P40344 YKL106C-AYKL106C-A 120 nt0.71□□□□□ -2.3
ATG3P40344 SOV1YMR066W 2697 nt0.7□□□□□ -2.3
ATG3P40344 ESP1YGR098C 4893 nt0.67□□□□□ -2.3
ATG3P40344 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
ATG3P40344 FMP27YLR454W 7887 nt0.67□□□□□ -2.3
ATG3P40344 YDL114W-AYDL114W-A 114 nt0.59□□□□□ -2.31
ATG3P40344 tV(UAC)QtV(UAC)Q 76 nt0.59□□□□□ -2.31
ATG3P40344 tF(GAA)BtF(GAA)B 73 nt0.57□□□□□ -2.32
ATG3P40344 tF(GAA)FtF(GAA)F 73 nt0.57□□□□□ -2.32
ATG3P40344 tF(GAA)GtF(GAA)G 73 nt0.57□□□□□ -2.32
ATG3P40344 tF(GAA)H1tF(GAA)H1 73 nt0.57□□□□□ -2.32
ATG3P40344 tF(GAA)H2tF(GAA)H2 73 nt0.57□□□□□ -2.32
ATG3P40344 tF(GAA)MtF(GAA)M 73 nt0.57□□□□□ -2.32
ATG3P40344 tF(GAA)P1tF(GAA)P1 73 nt0.57□□□□□ -2.32
ATG3P40344 tF(GAA)P2tF(GAA)P2 73 nt0.57□□□□□ -2.32
ATG3P40344 THO2YNL139C 4794 nt0.54□□□□□ -2.32
ATG3P40344 YOR376W-AYOR376W-A 156 nt0.54□□□□□ -2.32
ATG3P40344 UTP20YBL004W 7482 nt0.53□□□□□ -2.33
ATG3P40344 YKL145W-AYKL145W-A 93 nt0.5□□□□□ -2.33
ATG3P40344 YOL014WYOL014W 375 nt0.44□□□□□ -2.34
ATG3P40344 YOL013W-AYOL013W-A 192 nt0.41□□□□□ -2.34
ATG3P40344 snR128snR128 126 nt0.41□□□□□ -2.34
ATG3P40344 YOR316C-AYOR316C-A 210 nt0.41□□□□□ -2.34
ATG3P40344 snR77snR77 88 nt0.31□□□□□ -2.36
ATG3P40344 PAU9YBL108C-A 129 nt0.31□□□□□ -2.36
ATG3P40344 SBH2YER019C-A 267 nt0.28□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms