Protein–RNA interactions for Protein: P39994

YEL020C, Putative 2-hydroxyacyl-CoA lyase, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YEL020CP39994 VAM6YDL077C 3150 nt1.05□□□□□ -2.24
YEL020CP39994 SCC2YDR180W 4482 nt1.04□□□□□ -2.24
YEL020CP39994 EST1YLR233C 2100 nt1.03□□□□□ -2.24
YEL020CP39994 tD(GUC)QtD(GUC)Q 75 nt1.03□□□□□ -2.24
YEL020CP39994 YGR240C-AYGR240C-A 201 nt1.03□□□□□ -2.24
YEL020CP39994 YBL100W-CYBL100W-C 120 nt1.03□□□□□ -2.24
YEL020CP39994 DOP1YDR141C 5097 nt1.03□□□□□ -2.25
YEL020CP39994 RKR1YMR247C 4689 nt1.02□□□□□ -2.25
YEL020CP39994 YLL006W-AYLL006W-A 177 nt1.01□□□□□ -2.25
YEL020CP39994 CSE1YGL238W 2883 nt1.01□□□□□ -2.25
YEL020CP39994 snR69snR69 101 nt1□□□□□ -2.25
YEL020CP39994 snR47snR47 99 nt0.99□□□□□ -2.25
YEL020CP39994 PAU12YGR294W 363 nt0.98□□□□□ -2.25
YEL020CP39994 PAU24YBR301W 363 nt0.98□□□□□ -2.25
YEL020CP39994 ORC3YLL004W 1851 nt0.97□□□□□ -2.25
YEL020CP39994 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
YEL020CP39994 YLR299C-AYLR299C-A 93 nt0.95□□□□□ -2.26
YEL020CP39994 YDL159C-BYDL159C-B 177 nt0.94□□□□□ -2.26
YEL020CP39994 YOR192C-BYOR192C-B 5313 nt0.93□□□□□ -2.26
YEL020CP39994 UTP20YBL004W 7482 nt0.92□□□□□ -2.26
YEL020CP39994 RDS3YPR094W 324 nt0.92□□□□□ -2.26
YEL020CP39994 YPL060C-AYPL060C-A 3315 nt0.91□□□□□ -2.26
YEL020CP39994 tF(GAA)BtF(GAA)B 73 nt0.9□□□□□ -2.27
YEL020CP39994 tF(GAA)FtF(GAA)F 73 nt0.9□□□□□ -2.27
YEL020CP39994 tF(GAA)GtF(GAA)G 73 nt0.9□□□□□ -2.27
YEL020CP39994 tF(GAA)H1tF(GAA)H1 73 nt0.9□□□□□ -2.27
YEL020CP39994 tF(GAA)H2tF(GAA)H2 73 nt0.9□□□□□ -2.27
YEL020CP39994 tF(GAA)MtF(GAA)M 73 nt0.9□□□□□ -2.27
YEL020CP39994 tF(GAA)P1tF(GAA)P1 73 nt0.9□□□□□ -2.27
YEL020CP39994 tF(GAA)P2tF(GAA)P2 73 nt0.9□□□□□ -2.27
YEL020CP39994 BUL2YML111W 2763 nt0.89□□□□□ -2.27
YEL020CP39994 EMT1tM(CAU)D 73 nt0.89□□□□□ -2.27
YEL020CP39994 EMT5tM(CAU)J1 73 nt0.89□□□□□ -2.27
YEL020CP39994 EMT3tM(CAU)J2 73 nt0.89□□□□□ -2.27
YEL020CP39994 EMT4tM(CAU)M 73 nt0.89□□□□□ -2.27
YEL020CP39994 EMT2tM(CAU)O2 73 nt0.89□□□□□ -2.27
YEL020CP39994 YPR117WYPR117W 7470 nt0.85□□□□□ -2.27
YEL020CP39994 YJL077W-AYJL077W-A 87 nt0.85□□□□□ -2.27
YEL020CP39994 YML054C-AYML054C-A 159 nt0.85□□□□□ -2.27
YEL020CP39994 YNL054W-BYNL054W-B 5250 nt0.85□□□□□ -2.27
YEL020CP39994 tQ(UUG)QtQ(UUG)Q 76 nt0.83□□□□□ -2.28
YEL020CP39994 YDR371C-AYDR371C-A 105 nt0.8□□□□□ -2.28
YEL020CP39994 YHR180C-BYHR180C-B 105 nt0.8□□□□□ -2.28
YEL020CP39994 snR64snR64 101 nt0.79□□□□□ -2.28
YEL020CP39994 YMR160WYMR160W 2451 nt0.78□□□□□ -2.28
YEL020CP39994 YBR109W-AYBR109W-A 225 nt0.78□□□□□ -2.28
YEL020CP39994 PET111YMR257C 2403 nt0.77□□□□□ -2.29
YEL020CP39994 YKL225WYKL225W 348 nt0.76□□□□□ -2.29
YEL020CP39994 snR53snR53 91 nt0.76□□□□□ -2.29
YEL020CP39994 YOL014WYOL014W 375 nt0.75□□□□□ -2.29
YEL020CP39994 snR50snR50 90 nt0.75□□□□□ -2.29
YEL020CP39994 RPL41AYDL184C 78 nt0.74□□□□□ -2.29
YEL020CP39994 YER090C-AYER090C-A 90 nt0.72□□□□□ -2.29
YEL020CP39994 LTE1YAL024C 4308 nt0.72□□□□□ -2.29
YEL020CP39994 snR38snR38 95 nt0.71□□□□□ -2.3
YEL020CP39994 YBR296C-AYBR296C-A 120 nt0.7□□□□□ -2.3
YEL020CP39994 YKL145W-AYKL145W-A 93 nt0.69□□□□□ -2.3
YEL020CP39994 YPR159C-AYPR159C-A 102 nt0.69□□□□□ -2.3
YEL020CP39994 AI1Q0050 2505 nt0.65□□□□□ -2.31
YEL020CP39994 tT(AGU)BtT(AGU)B 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)CtT(AGU)C 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)DtT(AGU)D 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)HtT(AGU)H 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)I1tT(AGU)I1 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)I2tT(AGU)I2 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)JtT(AGU)J 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)N1tT(AGU)N1 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)N2tT(AGU)N2 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)O1tT(AGU)O1 73 nt0.64□□□□□ -2.31
YEL020CP39994 tT(AGU)O2tT(AGU)O2 73 nt0.64□□□□□ -2.31
YEL020CP39994 YBL100W-BYBL100W-B 5313 nt0.64□□□□□ -2.31
YEL020CP39994 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
YEL020CP39994 YDL159W-AYDL159W-A 132 nt0.58□□□□□ -2.32
YEL020CP39994 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
YEL020CP39994 snR67snR67 82 nt0.57□□□□□ -2.32
YEL020CP39994 SKI7YOR076C 2244 nt0.54□□□□□ -2.32
YEL020CP39994 MLP2YIL149C 5040 nt0.53□□□□□ -2.32
YEL020CP39994 MLP1YKR095W 5628 nt0.51□□□□□ -2.33
YEL020CP39994 IQG1YPL242C 4488 nt0.5□□□□□ -2.33
YEL020CP39994 YOR186C-AYOR186C-A 210 nt0.48□□□□□ -2.33
YEL020CP39994 YGR122C-AYGR122C-A 129 nt0.47□□□□□ -2.33
YEL020CP39994 THO2YNL139C 4794 nt0.46□□□□□ -2.34
YEL020CP39994 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
YEL020CP39994 YLR149C-AYLR149C-A 87 nt0.44□□□□□ -2.34
YEL020CP39994 YML100W-AYML100W-A 174 nt0.39□□□□□ -2.35
YEL020CP39994 SOV1YMR066W 2697 nt0.39□□□□□ -2.35
YEL020CP39994 YER078W-AYER078W-A 165 nt0.35□□□□□ -2.35
YEL020CP39994 YKL106C-AYKL106C-A 120 nt0.33□□□□□ -2.36
YEL020CP39994 YKL096C-BYKL096C-B 150 nt0.29□□□□□ -2.36
YEL020CP39994 snR128snR128 126 nt0.27□□□□□ -2.37
YEL020CP39994 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
YEL020CP39994 YOL013W-AYOL013W-A 192 nt0.26□□□□□ -2.37
YEL020CP39994 PAU9YBL108C-A 129 nt0.21□□□□□ -2.38
YEL020CP39994 YOR376W-AYOR376W-A 156 nt0.21□□□□□ -2.38
YEL020CP39994 YDL114W-AYDL114W-A 114 nt0.19□□□□□ -2.38
YEL020CP39994 tV(UAC)QtV(UAC)Q 76 nt0.15□□□□□ -2.39
YEL020CP39994 YOR316C-AYOR316C-A 210 nt0.1□□□□□ -2.39
YEL020CP39994 snR75snR75 89 nt0.09□□□□□ -2.4
YEL020CP39994 tA(UGC)QtA(UGC)Q 76 nt0.04□□□□□ -2.4
YEL020CP39994 SBH2YER019C-A 267 nt0.04□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 48.4 ms