Protein–RNA interactions for Protein: P39715

ECM1, Shuttling pre-60S factor ECM1, yeastyeast

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM1P39715 NIP1YMR309C 2439 nt0.92□□□□□ -2.26
ECM1P39715 ANS1YHR126C 480 nt0.92□□□□□ -2.26
ECM1P39715 YDL247W-AYDL247W-A 75 nt0.91□□□□□ -2.26
ECM1P39715 YAL037C-AYAL037C-A 93 nt0.91□□□□□ -2.26
ECM1P39715 PAU24YBR301W 363 nt0.91□□□□□ -2.26
ECM1P39715 tS(GCU)Q1tS(GCU)Q1 86 nt0.89□□□□□ -2.27
ECM1P39715 RPM2YML091C 3609 nt0.89□□□□□ -2.27
ECM1P39715 snR69snR69 101 nt0.87□□□□□ -2.27
ECM1P39715 tD(GUC)QtD(GUC)Q 75 nt0.87□□□□□ -2.27
ECM1P39715 YBL071C-BYBL071C-B 99 nt0.87□□□□□ -2.27
ECM1P39715 BUL2YML111W 2763 nt0.87□□□□□ -2.27
ECM1P39715 RPS26AYGL189C 360 nt0.85□□□□□ -2.27
ECM1P39715 YLR286W-AYLR286W-A 135 nt0.85□□□□□ -2.27
ECM1P39715 YDR371C-AYDR371C-A 105 nt0.84□□□□□ -2.27
ECM1P39715 PET111YMR257C 2403 nt0.84□□□□□ -2.28
ECM1P39715 LTE1YAL024C 4308 nt0.82□□□□□ -2.28
ECM1P39715 PAU12YGR294W 363 nt0.81□□□□□ -2.28
ECM1P39715 ORC3YLL004W 1851 nt0.8□□□□□ -2.28
ECM1P39715 YIL142C-AYIL142C-A 333 nt0.79□□□□□ -2.28
ECM1P39715 RDS3YPR094W 324 nt0.78□□□□□ -2.28
ECM1P39715 YNL054W-BYNL054W-B 5250 nt0.76□□□□□ -2.29
ECM1P39715 YDL159C-BYDL159C-B 177 nt0.76□□□□□ -2.29
ECM1P39715 YOL164W-AYOL164W-A 183 nt0.76□□□□□ -2.29
ECM1P39715 YLL066W-BYLL066W-B 171 nt0.75□□□□□ -2.29
ECM1P39715 snR45snR45 172 nt0.75□□□□□ -2.29
ECM1P39715 YPL060C-AYPL060C-A 3315 nt0.74□□□□□ -2.29
ECM1P39715 tQ(UUG)QtQ(UUG)Q 76 nt0.74□□□□□ -2.29
ECM1P39715 YLR299C-AYLR299C-A 93 nt0.74□□□□□ -2.29
ECM1P39715 YJL077W-AYJL077W-A 87 nt0.73□□□□□ -2.29
ECM1P39715 snR62snR62 100 nt0.71□□□□□ -2.3
ECM1P39715 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
ECM1P39715 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
ECM1P39715 YGR240C-AYGR240C-A 201 nt0.67□□□□□ -2.3
ECM1P39715 YBL100W-CYBL100W-C 120 nt0.67□□□□□ -2.3
ECM1P39715 snR47snR47 99 nt0.66□□□□□ -2.3
ECM1P39715 YDR034C-AYDR034C-A 177 nt0.65□□□□□ -2.31
ECM1P39715 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
ECM1P39715 snR50snR50 90 nt0.62□□□□□ -2.31
ECM1P39715 YBL100W-BYBL100W-B 5313 nt0.62□□□□□ -2.31
ECM1P39715 tT(AGU)BtT(AGU)B 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)CtT(AGU)C 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)DtT(AGU)D 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)HtT(AGU)H 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)I1tT(AGU)I1 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)I2tT(AGU)I2 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)JtT(AGU)J 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)N1tT(AGU)N1 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)N2tT(AGU)N2 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)O1tT(AGU)O1 73 nt0.61□□□□□ -2.31
ECM1P39715 tT(AGU)O2tT(AGU)O2 73 nt0.61□□□□□ -2.31
ECM1P39715 YML054C-AYML054C-A 159 nt0.6□□□□□ -2.31
ECM1P39715 YER090C-AYER090C-A 90 nt0.57□□□□□ -2.32
ECM1P39715 YHR180C-BYHR180C-B 105 nt0.56□□□□□ -2.32
ECM1P39715 AI1Q0050 2505 nt0.54□□□□□ -2.32
ECM1P39715 IQG1YPL242C 4488 nt0.53□□□□□ -2.32
ECM1P39715 YMR160WYMR160W 2451 nt0.52□□□□□ -2.33
ECM1P39715 MLP1YKR095W 5628 nt0.51□□□□□ -2.33
ECM1P39715 MLP2YIL149C 5040 nt0.48□□□□□ -2.33
ECM1P39715 YOR186C-AYOR186C-A 210 nt0.47□□□□□ -2.33
ECM1P39715 YBR109W-AYBR109W-A 225 nt0.47□□□□□ -2.33
ECM1P39715 RPL41AYDL184C 78 nt0.44□□□□□ -2.34
ECM1P39715 THO2YNL139C 4794 nt0.44□□□□□ -2.34
ECM1P39715 snR67snR67 82 nt0.39□□□□□ -2.35
ECM1P39715 YBR296C-AYBR296C-A 120 nt0.39□□□□□ -2.35
ECM1P39715 snR38snR38 95 nt0.38□□□□□ -2.35
ECM1P39715 YKL225WYKL225W 348 nt0.37□□□□□ -2.35
ECM1P39715 UTP20YBL004W 7482 nt0.36□□□□□ -2.35
ECM1P39715 SOV1YMR066W 2697 nt0.35□□□□□ -2.35
ECM1P39715 FMP27YLR454W 7887 nt0.33□□□□□ -2.36
ECM1P39715 snR64snR64 101 nt0.31□□□□□ -2.36
ECM1P39715 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
ECM1P39715 YML100W-AYML100W-A 174 nt0.27□□□□□ -2.37
ECM1P39715 snR128snR128 126 nt0.25□□□□□ -2.37
ECM1P39715 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
ECM1P39715 SKI7YOR076C 2244 nt0.22□□□□□ -2.37
ECM1P39715 YKL145W-AYKL145W-A 93 nt0.18□□□□□ -2.38
ECM1P39715 tF(GAA)BtF(GAA)B 73 nt0.17□□□□□ -2.38
ECM1P39715 tF(GAA)FtF(GAA)F 73 nt0.17□□□□□ -2.38
ECM1P39715 tF(GAA)GtF(GAA)G 73 nt0.17□□□□□ -2.38
ECM1P39715 tF(GAA)H1tF(GAA)H1 73 nt0.17□□□□□ -2.38
ECM1P39715 tF(GAA)H2tF(GAA)H2 73 nt0.17□□□□□ -2.38
ECM1P39715 tF(GAA)MtF(GAA)M 73 nt0.17□□□□□ -2.38
ECM1P39715 tF(GAA)P1tF(GAA)P1 73 nt0.17□□□□□ -2.38
ECM1P39715 tF(GAA)P2tF(GAA)P2 73 nt0.17□□□□□ -2.38
ECM1P39715 snR53snR53 91 nt0.17□□□□□ -2.38
ECM1P39715 YDL159W-AYDL159W-A 132 nt0.15□□□□□ -2.39
ECM1P39715 PAU9YBL108C-A 129 nt0.12□□□□□ -2.39
ECM1P39715 YKL106C-AYKL106C-A 120 nt0.04□□□□□ -2.4
ECM1P39715 YGR122C-AYGR122C-A 129 nt0.02□□□□□ -2.41
ECM1P39715 YOL014WYOL014W 375 nt0□□□□□ -2.41
ECM1P39715 YOR376W-AYOR376W-A 156 nt-0.05□□□□□ -2.42
ECM1P39715 tA(UGC)QtA(UGC)Q 76 nt-0.08□□□□□ -2.42
ECM1P39715 YER078W-AYER078W-A 165 nt-0.09□□□□□ -2.42
ECM1P39715 SBH2YER019C-A 267 nt-0.13□□□□□ -2.43
ECM1P39715 YLR149C-AYLR149C-A 87 nt-0.16□□□□□ -2.44
ECM1P39715 YDL114W-AYDL114W-A 114 nt-0.22□□□□□ -2.44
ECM1P39715 YOR316C-AYOR316C-A 210 nt-0.22□□□□□ -2.44
ECM1P39715 snR161snR161 161 nt-0.26□□□□□ -2.45
ECM1P39715 tV(UAC)QtV(UAC)Q 76 nt-0.29□□□□□ -2.46
ECM1P39715 snR77snR77 88 nt-0.32□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms