Protein–RNA interactions for Protein: P38886

RPN10, 26S proteasome regulatory subunit RPN10, yeastyeast

Known RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN10P38886 YMR160WYMR160W 2451 nt0.84□□□□□ -2.27
RPN10P38886 PMP2YEL017C-A 132 nt0.84□□□□□ -2.27
RPN10P38886 YNL266WYNL266W 420 nt0.84□□□□□ -2.27
RPN10P38886 RPS26AYGL189C 360 nt0.83□□□□□ -2.28
RPN10P38886 PET111YMR257C 2403 nt0.82□□□□□ -2.28
RPN10P38886 YNL103W-AYNL103W-A 90 nt0.81□□□□□ -2.28
RPN10P38886 YDR371C-AYDR371C-A 105 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)I2tT(AGU)I2 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)JtT(AGU)J 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)N1tT(AGU)N1 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)N2tT(AGU)N2 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)O1tT(AGU)O1 73 nt0.8□□□□□ -2.28
RPN10P38886 tT(AGU)O2tT(AGU)O2 73 nt0.8□□□□□ -2.28
RPN10P38886 YKL145W-AYKL145W-A 93 nt0.78□□□□□ -2.28
RPN10P38886 YBR178WYBR178W 375 nt0.78□□□□□ -2.28
RPN10P38886 CSE1YGL238W 2883 nt0.78□□□□□ -2.29
RPN10P38886 snR61snR61 90 nt0.77□□□□□ -2.29
RPN10P38886 SEC10YLR166C 2616 nt0.77□□□□□ -2.29
RPN10P38886 IQG1YPL242C 4488 nt0.75□□□□□ -2.29
RPN10P38886 MYO1YHR023W 5787 nt0.73□□□□□ -2.29
RPN10P38886 ORC3YLL004W 1851 nt0.73□□□□□ -2.29
RPN10P38886 snR69snR69 101 nt0.72□□□□□ -2.29
RPN10P38886 EST1YLR233C 2100 nt0.72□□□□□ -2.29
RPN10P38886 MLP1YKR095W 5628 nt0.71□□□□□ -2.3
RPN10P38886 TFB5YDR079C-A 219 nt0.71□□□□□ -2.3
RPN10P38886 YBL100W-BYBL100W-B 5313 nt0.71□□□□□ -2.3
RPN10P38886 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
RPN10P38886 YBR196C-AYBR196C-A 150 nt0.69□□□□□ -2.3
RPN10P38886 SBH1YER087C-B 249 nt0.67□□□□□ -2.3
RPN10P38886 YJL077W-AYJL077W-A 87 nt0.67□□□□□ -2.3
RPN10P38886 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
RPN10P38886 tD(GUC)QtD(GUC)Q 75 nt0.66□□□□□ -2.3
RPN10P38886 YBL109WYBL109W 336 nt0.64□□□□□ -2.31
RPN10P38886 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
RPN10P38886 YGL041C-BYGL041C-B 183 nt0.63□□□□□ -2.31
RPN10P38886 RDS3YPR094W 324 nt0.63□□□□□ -2.31
RPN10P38886 YNL054W-BYNL054W-B 5250 nt0.63□□□□□ -2.31
RPN10P38886 snR81snR81 201 nt0.61□□□□□ -2.31
RPN10P38886 YAL037C-AYAL037C-A 93 nt0.61□□□□□ -2.31
RPN10P38886 YMR326CYMR326C 309 nt0.61□□□□□ -2.31
RPN10P38886 AI1Q0050 2505 nt0.59□□□□□ -2.31
RPN10P38886 YLR286W-AYLR286W-A 135 nt0.58□□□□□ -2.32
RPN10P38886 YDR524C-AYDR524C-A 120 nt0.57□□□□□ -2.32
RPN10P38886 YHR217CYHR217C 462 nt0.57□□□□□ -2.32
RPN10P38886 FMP27YLR454W 7887 nt0.54□□□□□ -2.32
RPN10P38886 YDL159C-BYDL159C-B 177 nt0.52□□□□□ -2.33
RPN10P38886 YBL071C-BYBL071C-B 99 nt0.51□□□□□ -2.33
RPN10P38886 YOL083C-AYOL083C-A 141 nt0.51□□□□□ -2.33
RPN10P38886 YOR186C-AYOR186C-A 210 nt0.51□□□□□ -2.33
RPN10P38886 MLP2YIL149C 5040 nt0.5□□□□□ -2.33
RPN10P38886 ESP1YGR098C 4893 nt0.5□□□□□ -2.33
RPN10P38886 THO2YNL139C 4794 nt0.49□□□□□ -2.33
RPN10P38886 tQ(UUG)QtQ(UUG)Q 76 nt0.48□□□□□ -2.33
RPN10P38886 YLR299C-AYLR299C-A 93 nt0.48□□□□□ -2.33
RPN10P38886 YER090C-AYER090C-A 90 nt0.44□□□□□ -2.34
RPN10P38886 SOV1YMR066W 2697 nt0.42□□□□□ -2.34
RPN10P38886 tS(GCU)Q1tS(GCU)Q1 86 nt0.42□□□□□ -2.34
RPN10P38886 YER078W-AYER078W-A 165 nt0.4□□□□□ -2.35
RPN10P38886 YOL164W-AYOL164W-A 183 nt0.37□□□□□ -2.35
RPN10P38886 snR50snR50 90 nt0.37□□□□□ -2.35
RPN10P38886 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
RPN10P38886 snR62snR62 100 nt0.29□□□□□ -2.36
RPN10P38886 YML054C-AYML054C-A 159 nt0.29□□□□□ -2.36
RPN10P38886 YBL100W-CYBL100W-C 120 nt0.29□□□□□ -2.36
RPN10P38886 YGR240C-AYGR240C-A 201 nt0.28□□□□□ -2.36
RPN10P38886 YDL247W-AYDL247W-A 75 nt0.25□□□□□ -2.37
RPN10P38886 YML100W-AYML100W-A 174 nt0.23□□□□□ -2.37
RPN10P38886 YHR180C-BYHR180C-B 105 nt0.22□□□□□ -2.37
RPN10P38886 snR47snR47 99 nt0.21□□□□□ -2.38
RPN10P38886 snR67snR67 82 nt0.2□□□□□ -2.38
RPN10P38886 snR128snR128 126 nt0.15□□□□□ -2.39
RPN10P38886 YBR109W-AYBR109W-A 225 nt0.15□□□□□ -2.39
RPN10P38886 YDR034C-AYDR034C-A 177 nt0.13□□□□□ -2.39
RPN10P38886 YLL066W-BYLL066W-B 171 nt0.12□□□□□ -2.39
RPN10P38886 snR45snR45 172 nt0.12□□□□□ -2.39
RPN10P38886 YBR296C-AYBR296C-A 120 nt0.09□□□□□ -2.4
RPN10P38886 RPL41AYDL184C 78 nt0.08□□□□□ -2.4
RPN10P38886 snR38snR38 95 nt0.06□□□□□ -2.4
RPN10P38886 SKI7YOR076C 2244 nt0.02□□□□□ -2.41
RPN10P38886 YKL225WYKL225W 348 nt-0.04□□□□□ -2.42
RPN10P38886 tA(UGC)QtA(UGC)Q 76 nt-0.15□□□□□ -2.43
RPN10P38886 PAU9YBL108C-A 129 nt-0.15□□□□□ -2.43
RPN10P38886 snR64snR64 101 nt-0.16□□□□□ -2.44
RPN10P38886 SBH2YER019C-A 267 nt-0.23□□□□□ -2.45
RPN10P38886 YJL113WYJL113W 4647 nt-0.26□□□□□ -2.45
RPN10P38886 YKL106C-AYKL106C-A 120 nt-0.27□□□□□ -2.45
RPN10P38886 snR53snR53 91 nt-0.32□□□□□ -2.46
RPN10P38886 YOR376W-AYOR376W-A 156 nt-0.33□□□□□ -2.46
RPN10P38886 YDL159W-AYDL159W-A 132 nt-0.41□□□□□ -2.48
RPN10P38886 YOR316C-AYOR316C-A 210 nt-0.44□□□□□ -2.48
RPN10P38886 YHL009W-BYHL009W-B 5409 nt-0.46□□□□□ -2.48
RPN10P38886 YGR122C-AYGR122C-A 129 nt-0.47□□□□□ -2.48
RPN10P38886 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
RPN10P38886 snR161snR161 161 nt-0.5□□□□□ -2.49
RPN10P38886 YDL114W-AYDL114W-A 114 nt-0.63□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 109.6 ms