Protein–RNA interactions for Protein: P38633

SOH1, Mediator of RNA polymerase II transcription subunit 31, yeastyeast

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SOH1P38633 CCH1YGR217W 6120 nt1.32□□□□□ -2.2
SOH1P38633 tW(CCA)G1tW(CCA)G1 72 nt1.31□□□□□ -2.2
SOH1P38633 tW(CCA)G2tW(CCA)G2 72 nt1.31□□□□□ -2.2
SOH1P38633 tW(CCA)JtW(CCA)J 72 nt1.31□□□□□ -2.2
SOH1P38633 tW(CCA)KtW(CCA)K 72 nt1.31□□□□□ -2.2
SOH1P38633 tW(CCA)MtW(CCA)M 72 nt1.31□□□□□ -2.2
SOH1P38633 tW(CCA)PtW(CCA)P 72 nt1.31□□□□□ -2.2
SOH1P38633 snR38snR38 95 nt1.3□□□□□ -2.2
SOH1P38633 SCC2YDR180W 4482 nt1.3□□□□□ -2.2
SOH1P38633 YPR117WYPR117W 7470 nt1.3□□□□□ -2.2
SOH1P38633 AI1Q0050 2505 nt1.27□□□□□ -2.21
SOH1P38633 YER090C-AYER090C-A 90 nt1.27□□□□□ -2.21
SOH1P38633 YOL019W-AYOL019W-A 153 nt1.27□□□□□ -2.21
SOH1P38633 YNL284C-BYNL284C-B 5268 nt1.26□□□□□ -2.21
SOH1P38633 MLP2YIL149C 5040 nt1.24□□□□□ -2.21
SOH1P38633 RKR1YMR247C 4689 nt1.24□□□□□ -2.21
SOH1P38633 SKI7YOR076C 2244 nt1.21□□□□□ -2.21
SOH1P38633 YOR192C-BYOR192C-B 5313 nt1.2□□□□□ -2.22
SOH1P38633 YLR149C-AYLR149C-A 87 nt1.19□□□□□ -2.22
SOH1P38633 YNL054W-BYNL054W-B 5250 nt1.18□□□□□ -2.22
SOH1P38633 PET111YMR257C 2403 nt1.16□□□□□ -2.22
SOH1P38633 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
SOH1P38633 BUD3YCL014W 4911 nt1.14□□□□□ -2.23
SOH1P38633 YDL159W-AYDL159W-A 132 nt1.14□□□□□ -2.23
SOH1P38633 tC(GCA)BtC(GCA)B 72 nt1.14□□□□□ -2.23
SOH1P38633 tC(GCA)GtC(GCA)G 72 nt1.14□□□□□ -2.23
SOH1P38633 tC(GCA)P1tC(GCA)P1 72 nt1.14□□□□□ -2.23
SOH1P38633 tC(GCA)P2tC(GCA)P2 72 nt1.14□□□□□ -2.23
SOH1P38633 YKL096C-BYKL096C-B 150 nt1.14□□□□□ -2.23
SOH1P38633 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
SOH1P38633 MLP1YKR095W 5628 nt1.08□□□□□ -2.24
SOH1P38633 snR67snR67 82 nt1.08□□□□□ -2.24
SOH1P38633 PAU24YBR301W 363 nt1.08□□□□□ -2.24
SOH1P38633 YGR122C-AYGR122C-A 129 nt1.07□□□□□ -2.24
SOH1P38633 IQG1YPL242C 4488 nt1.06□□□□□ -2.24
SOH1P38633 BEM2YER155C 6504 nt1.05□□□□□ -2.24
SOH1P38633 YBL100W-BYBL100W-B 5313 nt1.04□□□□□ -2.24
SOH1P38633 YJR029WYJR029W 5268 nt1.01□□□□□ -2.25
SOH1P38633 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
SOH1P38633 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
SOH1P38633 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
SOH1P38633 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
SOH1P38633 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
SOH1P38633 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
SOH1P38633 YMR272W-BYMR272W-B 108 nt0.99□□□□□ -2.25
SOH1P38633 YMR160WYMR160W 2451 nt0.93□□□□□ -2.26
SOH1P38633 snR75snR75 89 nt0.87□□□□□ -2.27
SOH1P38633 YOR186C-AYOR186C-A 210 nt0.87□□□□□ -2.27
SOH1P38633 IML1YJR138W 4755 nt0.87□□□□□ -2.27
SOH1P38633 YER078W-AYER078W-A 165 nt0.82□□□□□ -2.28
SOH1P38633 tV(UAC)BtV(UAC)B 74 nt0.82□□□□□ -2.28
SOH1P38633 tV(UAC)DtV(UAC)D 74 nt0.82□□□□□ -2.28
SOH1P38633 YKL106C-AYKL106C-A 120 nt0.79□□□□□ -2.28
SOH1P38633 YPR159C-AYPR159C-A 102 nt0.79□□□□□ -2.28
SOH1P38633 tH(GUG)E1tH(GUG)E1 72 nt0.76□□□□□ -2.29
SOH1P38633 tH(GUG)E2tH(GUG)E2 72 nt0.76□□□□□ -2.29
SOH1P38633 tH(GUG)G1tH(GUG)G1 72 nt0.76□□□□□ -2.29
SOH1P38633 tH(GUG)G2tH(GUG)G2 72 nt0.76□□□□□ -2.29
SOH1P38633 tH(GUG)HtH(GUG)H 72 nt0.76□□□□□ -2.29
SOH1P38633 tH(GUG)KtH(GUG)K 72 nt0.76□□□□□ -2.29
SOH1P38633 tH(GUG)MtH(GUG)M 72 nt0.76□□□□□ -2.29
SOH1P38633 MYO1YHR023W 5787 nt0.75□□□□□ -2.29
SOH1P38633 UTP20YBL004W 7482 nt0.75□□□□□ -2.29
SOH1P38633 YML100W-AYML100W-A 174 nt0.73□□□□□ -2.29
SOH1P38633 ESP1YGR098C 4893 nt0.68□□□□□ -2.3
SOH1P38633 YDL114W-AYDL114W-A 114 nt0.66□□□□□ -2.3
SOH1P38633 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
SOH1P38633 FMP27YLR454W 7887 nt0.62□□□□□ -2.31
SOH1P38633 UTP10YJL109C 5310 nt0.61□□□□□ -2.31
SOH1P38633 SOV1YMR066W 2697 nt0.61□□□□□ -2.31
SOH1P38633 tV(UAC)QtV(UAC)Q 76 nt0.58□□□□□ -2.32
SOH1P38633 YOR376W-AYOR376W-A 156 nt0.5□□□□□ -2.33
SOH1P38633 YOR316C-AYOR316C-A 210 nt0.48□□□□□ -2.33
SOH1P38633 snR128snR128 126 nt0.45□□□□□ -2.34
SOH1P38633 YOL013W-AYOL013W-A 192 nt0.43□□□□□ -2.34
SOH1P38633 THO2YNL139C 4794 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)BtT(AGU)B 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)CtT(AGU)C 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)DtT(AGU)D 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)HtT(AGU)H 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)I1tT(AGU)I1 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)I2tT(AGU)I2 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)JtT(AGU)J 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)N1tT(AGU)N1 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)N2tT(AGU)N2 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)O1tT(AGU)O1 73 nt0.38□□□□□ -2.35
SOH1P38633 tT(AGU)O2tT(AGU)O2 73 nt0.38□□□□□ -2.35
SOH1P38633 SBH2YER019C-A 267 nt0.37□□□□□ -2.35
SOH1P38633 snR77snR77 88 nt0.35□□□□□ -2.35
SOH1P38633 PAU9YBL108C-A 129 nt0.35□□□□□ -2.35
SOH1P38633 YJL113WYJL113W 4647 nt0.25□□□□□ -2.37
SOH1P38633 tA(UGC)QtA(UGC)Q 76 nt0.2□□□□□ -2.38
SOH1P38633 tF(GAA)BtF(GAA)B 73 nt0.09□□□□□ -2.4
SOH1P38633 tF(GAA)FtF(GAA)F 73 nt0.09□□□□□ -2.4
SOH1P38633 tF(GAA)GtF(GAA)G 73 nt0.09□□□□□ -2.4
SOH1P38633 tF(GAA)H1tF(GAA)H1 73 nt0.09□□□□□ -2.4
SOH1P38633 tF(GAA)H2tF(GAA)H2 73 nt0.09□□□□□ -2.4
SOH1P38633 tF(GAA)MtF(GAA)M 73 nt0.09□□□□□ -2.4
SOH1P38633 tF(GAA)P1tF(GAA)P1 73 nt0.09□□□□□ -2.4
SOH1P38633 tF(GAA)P2tF(GAA)P2 73 nt0.09□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 38.9 ms