Protein–RNA interactions for Protein: P38339

RGD1, RHO GTPase-activating protein RGD1, yeastyeast

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGD1P38339 NST1YNL091W 3723 nt1.15□□□□□ -2.23
RGD1P38339 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
RGD1P38339 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
RGD1P38339 snR69snR69 101 nt1.13□□□□□ -2.23
RGD1P38339 YPL060C-AYPL060C-A 3315 nt1.13□□□□□ -2.23
RGD1P38339 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
RGD1P38339 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
RGD1P38339 YOL164W-AYOL164W-A 183 nt1.12□□□□□ -2.23
RGD1P38339 NIP1YMR309C 2439 nt1.11□□□□□ -2.23
RGD1P38339 YBL100W-CYBL100W-C 120 nt1.09□□□□□ -2.23
RGD1P38339 BUL2YML111W 2763 nt1.09□□□□□ -2.24
RGD1P38339 YOR192C-BYOR192C-B 5313 nt1.09□□□□□ -2.24
RGD1P38339 YPR117WYPR117W 7470 nt1.08□□□□□ -2.24
RGD1P38339 MYO1YHR023W 5787 nt1.08□□□□□ -2.24
RGD1P38339 YGR240C-AYGR240C-A 201 nt1.06□□□□□ -2.24
RGD1P38339 YDR034C-AYDR034C-A 177 nt1.05□□□□□ -2.24
RGD1P38339 RDS3YPR094W 324 nt1.05□□□□□ -2.24
RGD1P38339 YDL159C-BYDL159C-B 177 nt1.04□□□□□ -2.24
RGD1P38339 YLR299C-AYLR299C-A 93 nt1.04□□□□□ -2.24
RGD1P38339 UTP20YBL004W 7482 nt1.01□□□□□ -2.25
RGD1P38339 YJL077W-AYJL077W-A 87 nt1.01□□□□□ -2.25
RGD1P38339 PAU12YGR294W 363 nt1□□□□□ -2.25
RGD1P38339 snR47snR47 99 nt1□□□□□ -2.25
RGD1P38339 PAU24YBR301W 363 nt1□□□□□ -2.25
RGD1P38339 tF(GAA)BtF(GAA)B 73 nt0.97□□□□□ -2.25
RGD1P38339 YDR371C-AYDR371C-A 105 nt0.97□□□□□ -2.25
RGD1P38339 tF(GAA)FtF(GAA)F 73 nt0.97□□□□□ -2.25
RGD1P38339 tF(GAA)GtF(GAA)G 73 nt0.97□□□□□ -2.25
RGD1P38339 tF(GAA)H1tF(GAA)H1 73 nt0.97□□□□□ -2.25
RGD1P38339 tF(GAA)H2tF(GAA)H2 73 nt0.97□□□□□ -2.25
RGD1P38339 tF(GAA)MtF(GAA)M 73 nt0.97□□□□□ -2.25
RGD1P38339 tF(GAA)P1tF(GAA)P1 73 nt0.97□□□□□ -2.25
RGD1P38339 tF(GAA)P2tF(GAA)P2 73 nt0.97□□□□□ -2.25
RGD1P38339 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
RGD1P38339 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
RGD1P38339 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
RGD1P38339 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
RGD1P38339 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
RGD1P38339 ORC3YLL004W 1851 nt0.96□□□□□ -2.26
RGD1P38339 PET111YMR257C 2403 nt0.96□□□□□ -2.26
RGD1P38339 tQ(UUG)QtQ(UUG)Q 76 nt0.94□□□□□ -2.26
RGD1P38339 YNL054W-BYNL054W-B 5250 nt0.9□□□□□ -2.26
RGD1P38339 YMR160WYMR160W 2451 nt0.88□□□□□ -2.27
RGD1P38339 LTE1YAL024C 4308 nt0.88□□□□□ -2.27
RGD1P38339 YML054C-AYML054C-A 159 nt0.86□□□□□ -2.27
RGD1P38339 YHR180C-BYHR180C-B 105 nt0.84□□□□□ -2.27
RGD1P38339 YER090C-AYER090C-A 90 nt0.81□□□□□ -2.28
RGD1P38339 YBL100W-BYBL100W-B 5313 nt0.79□□□□□ -2.28
RGD1P38339 YOL014WYOL014W 375 nt0.79□□□□□ -2.28
RGD1P38339 snR50snR50 90 nt0.79□□□□□ -2.28
RGD1P38339 YBR109W-AYBR109W-A 225 nt0.77□□□□□ -2.29
RGD1P38339 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
RGD1P38339 MLP1YKR095W 5628 nt0.75□□□□□ -2.29
RGD1P38339 RPL41AYDL184C 78 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
RGD1P38339 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
RGD1P38339 YKL145W-AYKL145W-A 93 nt0.74□□□□□ -2.29
RGD1P38339 YKL225WYKL225W 348 nt0.72□□□□□ -2.29
RGD1P38339 snR64snR64 101 nt0.71□□□□□ -2.3
RGD1P38339 AI1Q0050 2505 nt0.7□□□□□ -2.3
RGD1P38339 YBR296C-AYBR296C-A 120 nt0.7□□□□□ -2.3
RGD1P38339 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
RGD1P38339 snR38snR38 95 nt0.67□□□□□ -2.3
RGD1P38339 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
RGD1P38339 IQG1YPL242C 4488 nt0.65□□□□□ -2.3
RGD1P38339 snR53snR53 91 nt0.65□□□□□ -2.31
RGD1P38339 YOR186C-AYOR186C-A 210 nt0.62□□□□□ -2.31
RGD1P38339 snR67snR67 82 nt0.61□□□□□ -2.31
RGD1P38339 FMP27YLR454W 7887 nt0.51□□□□□ -2.33
RGD1P38339 THO2YNL139C 4794 nt0.49□□□□□ -2.33
RGD1P38339 MLP2YIL149C 5040 nt0.48□□□□□ -2.33
RGD1P38339 SOV1YMR066W 2697 nt0.45□□□□□ -2.34
RGD1P38339 SKI7YOR076C 2244 nt0.45□□□□□ -2.34
RGD1P38339 YDL159W-AYDL159W-A 132 nt0.44□□□□□ -2.34
RGD1P38339 YML100W-AYML100W-A 174 nt0.42□□□□□ -2.34
RGD1P38339 ESP1YGR098C 4893 nt0.38□□□□□ -2.35
RGD1P38339 YER078W-AYER078W-A 165 nt0.36□□□□□ -2.35
RGD1P38339 YOL013W-AYOL013W-A 192 nt0.34□□□□□ -2.36
RGD1P38339 YGR122C-AYGR122C-A 129 nt0.33□□□□□ -2.36
RGD1P38339 snR128snR128 126 nt0.31□□□□□ -2.36
RGD1P38339 YKL106C-AYKL106C-A 120 nt0.26□□□□□ -2.37
RGD1P38339 YLR149C-AYLR149C-A 87 nt0.23□□□□□ -2.37
RGD1P38339 PAU9YBL108C-A 129 nt0.17□□□□□ -2.38
RGD1P38339 YOR376W-AYOR376W-A 156 nt0.11□□□□□ -2.39
RGD1P38339 YDL114W-AYDL114W-A 114 nt0.03□□□□□ -2.4
RGD1P38339 YKL096C-BYKL096C-B 150 nt0.03□□□□□ -2.4
RGD1P38339 tA(UGC)QtA(UGC)Q 76 nt0□□□□□ -2.41
RGD1P38339 YOR316C-AYOR316C-A 210 nt-0.01□□□□□ -2.41
RGD1P38339 tV(UAC)QtV(UAC)Q 76 nt-0.04□□□□□ -2.42
RGD1P38339 SBH2YER019C-A 267 nt-0.1□□□□□ -2.43
RGD1P38339 snR77snR77 88 nt-0.14□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms