Protein–RNA interactions for Protein: P38221

CDS1, Phosphatidate cytidylyltransferase, yeastyeast

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDS1P38221 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
CDS1P38221 snR69snR69 101 nt0.65□□□□□ -2.31
CDS1P38221 BUL2YML111W 2763 nt0.64□□□□□ -2.31
CDS1P38221 SBH1YER087C-B 249 nt0.64□□□□□ -2.31
CDS1P38221 UTP10YJL109C 5310 nt0.63□□□□□ -2.31
CDS1P38221 TFB5YDR079C-A 219 nt0.62□□□□□ -2.31
CDS1P38221 RCO1YMR075W 2055 nt0.61□□□□□ -2.31
CDS1P38221 ORC3YLL004W 1851 nt0.61□□□□□ -2.31
CDS1P38221 EST1YLR233C 2100 nt0.61□□□□□ -2.31
CDS1P38221 tD(GUC)QtD(GUC)Q 75 nt0.6□□□□□ -2.31
CDS1P38221 YGL041C-BYGL041C-B 183 nt0.59□□□□□ -2.31
CDS1P38221 RDS3YPR094W 324 nt0.59□□□□□ -2.31
CDS1P38221 MYO1YHR023W 5787 nt0.58□□□□□ -2.32
CDS1P38221 tQ(UUG)QtQ(UUG)Q 76 nt0.56□□□□□ -2.32
CDS1P38221 YMR326CYMR326C 309 nt0.55□□□□□ -2.32
CDS1P38221 YOR186C-AYOR186C-A 210 nt0.55□□□□□ -2.32
CDS1P38221 YIL142C-AYIL142C-A 333 nt0.53□□□□□ -2.32
CDS1P38221 tT(AGU)BtT(AGU)B 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)CtT(AGU)C 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)DtT(AGU)D 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)HtT(AGU)H 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)I1tT(AGU)I1 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)I2tT(AGU)I2 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)JtT(AGU)J 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)N1tT(AGU)N1 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)N2tT(AGU)N2 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)O1tT(AGU)O1 73 nt0.52□□□□□ -2.33
CDS1P38221 tT(AGU)O2tT(AGU)O2 73 nt0.52□□□□□ -2.33
CDS1P38221 YLR286W-AYLR286W-A 135 nt0.52□□□□□ -2.33
CDS1P38221 YAL037C-AYAL037C-A 93 nt0.51□□□□□ -2.33
CDS1P38221 YDL159C-BYDL159C-B 177 nt0.5□□□□□ -2.33
CDS1P38221 YOL083C-AYOL083C-A 141 nt0.5□□□□□ -2.33
CDS1P38221 YMR160WYMR160W 2451 nt0.48□□□□□ -2.33
CDS1P38221 YDR524C-AYDR524C-A 120 nt0.48□□□□□ -2.33
CDS1P38221 YLR299C-AYLR299C-A 93 nt0.48□□□□□ -2.33
CDS1P38221 YBL100W-BYBL100W-B 5313 nt0.47□□□□□ -2.33
CDS1P38221 snR81snR81 201 nt0.46□□□□□ -2.34
CDS1P38221 YBL109WYBL109W 336 nt0.46□□□□□ -2.34
CDS1P38221 YHR217CYHR217C 462 nt0.45□□□□□ -2.34
CDS1P38221 IQG1YPL242C 4488 nt0.44□□□□□ -2.34
CDS1P38221 AI1Q0050 2505 nt0.44□□□□□ -2.34
CDS1P38221 MLP2YIL149C 5040 nt0.42□□□□□ -2.34
CDS1P38221 YBL100W-CYBL100W-C 120 nt0.4□□□□□ -2.35
CDS1P38221 UTP20YBL004W 7482 nt0.4□□□□□ -2.35
CDS1P38221 YBL071C-BYBL071C-B 99 nt0.38□□□□□ -2.35
CDS1P38221 YPL060C-AYPL060C-A 3315 nt0.38□□□□□ -2.35
CDS1P38221 YER090C-AYER090C-A 90 nt0.37□□□□□ -2.35
CDS1P38221 snR50snR50 90 nt0.33□□□□□ -2.36
CDS1P38221 FMP27YLR454W 7887 nt0.33□□□□□ -2.36
CDS1P38221 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
CDS1P38221 YOL164W-AYOL164W-A 183 nt0.3□□□□□ -2.36
CDS1P38221 YHR180C-BYHR180C-B 105 nt0.28□□□□□ -2.36
CDS1P38221 YKL145W-AYKL145W-A 93 nt0.28□□□□□ -2.36
CDS1P38221 tS(GCU)Q1tS(GCU)Q1 86 nt0.26□□□□□ -2.37
CDS1P38221 YML054C-AYML054C-A 159 nt0.26□□□□□ -2.37
CDS1P38221 YDL247W-AYDL247W-A 75 nt0.25□□□□□ -2.37
CDS1P38221 YGR240C-AYGR240C-A 201 nt0.25□□□□□ -2.37
CDS1P38221 YNL054W-BYNL054W-B 5250 nt0.25□□□□□ -2.37
CDS1P38221 snR67snR67 82 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)BtF(GAA)B 73 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)FtF(GAA)F 73 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)GtF(GAA)G 73 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)H1tF(GAA)H1 73 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)H2tF(GAA)H2 73 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)MtF(GAA)M 73 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)P1tF(GAA)P1 73 nt0.24□□□□□ -2.37
CDS1P38221 tF(GAA)P2tF(GAA)P2 73 nt0.24□□□□□ -2.37
CDS1P38221 snR128snR128 126 nt0.22□□□□□ -2.37
CDS1P38221 snR62snR62 100 nt0.21□□□□□ -2.38
CDS1P38221 snR47snR47 99 nt0.21□□□□□ -2.38
CDS1P38221 SOV1YMR066W 2697 nt0.2□□□□□ -2.38
CDS1P38221 ESP1YGR098C 4893 nt0.19□□□□□ -2.38
CDS1P38221 RPL41AYDL184C 78 nt0.12□□□□□ -2.39
CDS1P38221 YDR034C-AYDR034C-A 177 nt0.12□□□□□ -2.39
CDS1P38221 YML100W-AYML100W-A 174 nt0.12□□□□□ -2.39
CDS1P38221 YOL014WYOL014W 375 nt0.11□□□□□ -2.39
CDS1P38221 YBR296C-AYBR296C-A 120 nt0.09□□□□□ -2.4
CDS1P38221 YLL066W-BYLL066W-B 171 nt0.07□□□□□ -2.4
CDS1P38221 YBR109W-AYBR109W-A 225 nt0.05□□□□□ -2.4
CDS1P38221 snR45snR45 172 nt0.03□□□□□ -2.4
CDS1P38221 PAU9YBL108C-A 129 nt0.01□□□□□ -2.41
CDS1P38221 THO2YNL139C 4794 nt0.01□□□□□ -2.41
CDS1P38221 YER078W-AYER078W-A 165 nt-0.01□□□□□ -2.41
CDS1P38221 YKL225WYKL225W 348 nt-0.08□□□□□ -2.42
CDS1P38221 SKI7YOR076C 2244 nt-0.09□□□□□ -2.42
CDS1P38221 snR38snR38 95 nt-0.11□□□□□ -2.43
CDS1P38221 SBH2YER019C-A 267 nt-0.12□□□□□ -2.43
CDS1P38221 tA(UGC)QtA(UGC)Q 76 nt-0.19□□□□□ -2.44
CDS1P38221 snR64snR64 101 nt-0.2□□□□□ -2.44
CDS1P38221 YKL106C-AYKL106C-A 120 nt-0.21□□□□□ -2.44
CDS1P38221 YOR376W-AYOR376W-A 156 nt-0.38□□□□□ -2.47
CDS1P38221 snR53snR53 91 nt-0.39□□□□□ -2.47
CDS1P38221 snR161snR161 161 nt-0.4□□□□□ -2.47
CDS1P38221 YGR122C-AYGR122C-A 129 nt-0.45□□□□□ -2.48
CDS1P38221 YOR316C-AYOR316C-A 210 nt-0.46□□□□□ -2.48
CDS1P38221 YDL159W-AYDL159W-A 132 nt-0.48□□□□□ -2.49
CDS1P38221 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
CDS1P38221 YJL113WYJL113W 4647 nt-0.52□□□□□ -2.49
CDS1P38221 YDL114W-AYDL114W-A 114 nt-0.58□□□□□ -2.5
CDS1P38221 snR77snR77 88 nt-0.64□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms