Protein–RNA interactions for Protein: P33421

SDH3, Succinate dehydrogenase [ubiquinone] cytochrome b subunit, mitochondrial, yeastyeast

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDH3P33421 tF(GAA)H1tF(GAA)H1 73 nt0.46□□□□□ -2.34
SDH3P33421 tF(GAA)H2tF(GAA)H2 73 nt0.46□□□□□ -2.34
SDH3P33421 tF(GAA)MtF(GAA)M 73 nt0.46□□□□□ -2.34
SDH3P33421 tF(GAA)P1tF(GAA)P1 73 nt0.46□□□□□ -2.34
SDH3P33421 tF(GAA)P2tF(GAA)P2 73 nt0.46□□□□□ -2.34
SDH3P33421 CSE1YGL238W 2883 nt0.45□□□□□ -2.34
SDH3P33421 YKL145W-AYKL145W-A 93 nt0.45□□□□□ -2.34
SDH3P33421 YCL001W-BYCL001W-B 255 nt0.43□□□□□ -2.34
SDH3P33421 YGR146C-AYGR146C-A 162 nt0.42□□□□□ -2.34
SDH3P33421 RCO1YMR075W 2055 nt0.42□□□□□ -2.34
SDH3P33421 IQG1YPL242C 4488 nt0.4□□□□□ -2.35
SDH3P33421 ATP8Q0080 147 nt0.4□□□□□ -2.35
SDH3P33421 YNL170WYNL170W 396 nt0.4□□□□□ -2.35
SDH3P33421 YBL100W-BYBL100W-B 5313 nt0.4□□□□□ -2.35
SDH3P33421 YPL060C-AYPL060C-A 3315 nt0.39□□□□□ -2.35
SDH3P33421 Q0092Q0092 141 nt0.37□□□□□ -2.35
SDH3P33421 SOM1YEL059C-A 225 nt0.37□□□□□ -2.35
SDH3P33421 BIR1YJR089W 2865 nt0.36□□□□□ -2.35
SDH3P33421 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
SDH3P33421 YBR099CYBR099C 384 nt0.35□□□□□ -2.35
SDH3P33421 YOL014WYOL014W 375 nt0.34□□□□□ -2.36
SDH3P33421 EST1YLR233C 2100 nt0.33□□□□□ -2.36
SDH3P33421 YNL205CYNL205C 423 nt0.33□□□□□ -2.36
SDH3P33421 YCR095W-AYCR095W-A 159 nt0.32□□□□□ -2.36
SDH3P33421 snR69snR69 101 nt0.32□□□□□ -2.36
SDH3P33421 PMP2YEL017C-A 132 nt0.32□□□□□ -2.36
SDH3P33421 RPM2YML091C 3609 nt0.3□□□□□ -2.36
SDH3P33421 UTP20YBL004W 7482 nt0.29□□□□□ -2.36
SDH3P33421 ESP1YGR098C 4893 nt0.28□□□□□ -2.36
SDH3P33421 YNL266WYNL266W 420 nt0.28□□□□□ -2.36
SDH3P33421 YBR178WYBR178W 375 nt0.27□□□□□ -2.37
SDH3P33421 MLP1YKR095W 5628 nt0.27□□□□□ -2.37
SDH3P33421 SEC10YLR166C 2616 nt0.27□□□□□ -2.37
SDH3P33421 SOV1YMR066W 2697 nt0.25□□□□□ -2.37
SDH3P33421 AI1Q0050 2505 nt0.23□□□□□ -2.37
SDH3P33421 YOR186C-AYOR186C-A 210 nt0.23□□□□□ -2.37
SDH3P33421 YOL013W-AYOL013W-A 192 nt0.22□□□□□ -2.37
SDH3P33421 tD(GUC)QtD(GUC)Q 75 nt0.21□□□□□ -2.38
SDH3P33421 MLP2YIL149C 5040 nt0.2□□□□□ -2.38
SDH3P33421 YJL077W-AYJL077W-A 87 nt0.2□□□□□ -2.38
SDH3P33421 RDS3YPR094W 324 nt0.2□□□□□ -2.38
SDH3P33421 YBR196C-AYBR196C-A 150 nt0.19□□□□□ -2.38
SDH3P33421 tQ(UUG)QtQ(UUG)Q 76 nt0.18□□□□□ -2.38
SDH3P33421 THO2YNL139C 4794 nt0.17□□□□□ -2.38
SDH3P33421 YLR286W-AYLR286W-A 135 nt0.15□□□□□ -2.39
SDH3P33421 snR50snR50 90 nt0.14□□□□□ -2.39
SDH3P33421 YDL159C-BYDL159C-B 177 nt0.11□□□□□ -2.39
SDH3P33421 YNL103W-AYNL103W-A 90 nt0.11□□□□□ -2.39
SDH3P33421 YER090C-AYER090C-A 90 nt0.09□□□□□ -2.4
SDH3P33421 YLR299C-AYLR299C-A 93 nt0.07□□□□□ -2.4
SDH3P33421 YER078W-AYER078W-A 165 nt0.06□□□□□ -2.4
SDH3P33421 snR128snR128 126 nt0.05□□□□□ -2.4
SDH3P33421 snR81snR81 201 nt0.04□□□□□ -2.4
SDH3P33421 Q0143Q0143 153 nt0.04□□□□□ -2.4
SDH3P33421 YOL083C-AYOL083C-A 141 nt0.04□□□□□ -2.4
SDH3P33421 YML100W-AYML100W-A 174 nt0.02□□□□□ -2.41
SDH3P33421 YBL071C-BYBL071C-B 99 nt0.02□□□□□ -2.41
SDH3P33421 YGL041C-BYGL041C-B 183 nt-0.01□□□□□ -2.41
SDH3P33421 YML054C-AYML054C-A 159 nt-0.01□□□□□ -2.41
SDH3P33421 snR61snR61 90 nt-0.02□□□□□ -2.41
SDH3P33421 YAL037C-AYAL037C-A 93 nt-0.03□□□□□ -2.41
SDH3P33421 snR67snR67 82 nt-0.07□□□□□ -2.42
SDH3P33421 snR45snR45 172 nt-0.07□□□□□ -2.42
SDH3P33421 snR85snR85 171 nt-0.09□□□□□ -2.42
SDH3P33421 TFB5YDR079C-A 219 nt-0.09□□□□□ -2.42
SDH3P33421 YOL164W-AYOL164W-A 183 nt-0.11□□□□□ -2.43
SDH3P33421 SKI7YOR076C 2244 nt-0.14□□□□□ -2.43
SDH3P33421 YHR180C-BYHR180C-B 105 nt-0.14□□□□□ -2.43
SDH3P33421 PAU9YBL108C-A 129 nt-0.18□□□□□ -2.44
SDH3P33421 YBL109WYBL109W 336 nt-0.19□□□□□ -2.44
SDH3P33421 snR47snR47 99 nt-0.19□□□□□ -2.44
SDH3P33421 YGR240C-AYGR240C-A 201 nt-0.2□□□□□ -2.44
SDH3P33421 YBR109W-AYBR109W-A 225 nt-0.2□□□□□ -2.44
SDH3P33421 tS(GCU)Q1tS(GCU)Q1 86 nt-0.21□□□□□ -2.44
SDH3P33421 tA(UGC)QtA(UGC)Q 76 nt-0.23□□□□□ -2.45
SDH3P33421 SBH2YER019C-A 267 nt-0.24□□□□□ -2.45
SDH3P33421 snR38snR38 95 nt-0.24□□□□□ -2.45
SDH3P33421 YBL100W-CYBL100W-C 120 nt-0.26□□□□□ -2.45
SDH3P33421 YHR217CYHR217C 462 nt-0.28□□□□□ -2.45
SDH3P33421 YMR326CYMR326C 309 nt-0.28□□□□□ -2.45
SDH3P33421 RPL41AYDL184C 78 nt-0.29□□□□□ -2.46
SDH3P33421 YBR296C-AYBR296C-A 120 nt-0.29□□□□□ -2.46
SDH3P33421 snR62snR62 100 nt-0.32□□□□□ -2.46
SDH3P33421 YDR034C-AYDR034C-A 177 nt-0.35□□□□□ -2.47
SDH3P33421 YJL113WYJL113W 4647 nt-0.39□□□□□ -2.47
SDH3P33421 YDR524C-AYDR524C-A 120 nt-0.4□□□□□ -2.47
SDH3P33421 YKL225WYKL225W 348 nt-0.42□□□□□ -2.48
SDH3P33421 YOR376W-AYOR376W-A 156 nt-0.44□□□□□ -2.48
SDH3P33421 YKL106C-AYKL106C-A 120 nt-0.48□□□□□ -2.49
SDH3P33421 YLL066W-BYLL066W-B 171 nt-0.49□□□□□ -2.49
SDH3P33421 snR161snR161 161 nt-0.49□□□□□ -2.49
SDH3P33421 snR64snR64 101 nt-0.6□□□□□ -2.51
SDH3P33421 YDL247W-AYDL247W-A 75 nt-0.62□□□□□ -2.51
SDH3P33421 YOR316C-AYOR316C-A 210 nt-0.62□□□□□ -2.51
SDH3P33421 YDL159W-AYDL159W-A 132 nt-0.64□□□□□ -2.51
SDH3P33421 URB1YKL014C 5295 nt-0.65□□□□□ -2.51
SDH3P33421 snR33snR33 183 nt-0.67□□□□□ -2.52
SDH3P33421 snR77snR77 88 nt-0.72□□□□□ -2.52
SDH3P33421 YGR122C-AYGR122C-A 129 nt-0.73□□□□□ -2.53
SDH3P33421 YHL009W-BYHL009W-B 5409 nt-0.78□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 8 ms