Protein–RNA interactions for Protein: P33299

RPT1, 26S proteasome regulatory subunit 7 homolog, yeastyeast

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT1P33299 BEM2YER155C 6504 nt1.02□□□□□ -2.25
RPT1P33299 YIL142C-AYIL142C-A 333 nt1.02□□□□□ -2.25
RPT1P33299 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
RPT1P33299 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
RPT1P33299 IQG1YPL242C 4488 nt1.02□□□□□ -2.25
RPT1P33299 MLP1YKR095W 5628 nt1.01□□□□□ -2.25
RPT1P33299 RPS26AYGL189C 360 nt1.01□□□□□ -2.25
RPT1P33299 tS(GCU)Q1tS(GCU)Q1 86 nt1.01□□□□□ -2.25
RPT1P33299 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
RPT1P33299 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
RPT1P33299 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
RPT1P33299 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
RPT1P33299 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
RPT1P33299 YOL083C-AYOL083C-A 141 nt0.99□□□□□ -2.25
RPT1P33299 RDS3YPR094W 324 nt0.99□□□□□ -2.25
RPT1P33299 UTP20YBL004W 7482 nt0.99□□□□□ -2.25
RPT1P33299 YLR286W-AYLR286W-A 135 nt0.98□□□□□ -2.25
RPT1P33299 PAU12YGR294W 363 nt0.97□□□□□ -2.25
RPT1P33299 PAU24YBR301W 363 nt0.97□□□□□ -2.25
RPT1P33299 YOR192C-BYOR192C-B 5313 nt0.96□□□□□ -2.26
RPT1P33299 YDR371C-AYDR371C-A 105 nt0.96□□□□□ -2.26
RPT1P33299 YBL071C-BYBL071C-B 99 nt0.96□□□□□ -2.26
RPT1P33299 tF(GAA)BtF(GAA)B 73 nt0.91□□□□□ -2.26
RPT1P33299 tF(GAA)FtF(GAA)F 73 nt0.91□□□□□ -2.26
RPT1P33299 tF(GAA)GtF(GAA)G 73 nt0.91□□□□□ -2.26
RPT1P33299 tF(GAA)H1tF(GAA)H1 73 nt0.91□□□□□ -2.26
RPT1P33299 tF(GAA)H2tF(GAA)H2 73 nt0.91□□□□□ -2.26
RPT1P33299 tF(GAA)MtF(GAA)M 73 nt0.91□□□□□ -2.26
RPT1P33299 tF(GAA)P1tF(GAA)P1 73 nt0.91□□□□□ -2.26
RPT1P33299 tF(GAA)P2tF(GAA)P2 73 nt0.91□□□□□ -2.26
RPT1P33299 YNL054W-BYNL054W-B 5250 nt0.9□□□□□ -2.27
RPT1P33299 YDL159C-BYDL159C-B 177 nt0.9□□□□□ -2.27
RPT1P33299 YLR299C-AYLR299C-A 93 nt0.89□□□□□ -2.27
RPT1P33299 YBL100W-CYBL100W-C 120 nt0.89□□□□□ -2.27
RPT1P33299 snR62snR62 100 nt0.88□□□□□ -2.27
RPT1P33299 BUD3YCL014W 4911 nt0.88□□□□□ -2.27
RPT1P33299 YOL164W-AYOL164W-A 183 nt0.87□□□□□ -2.27
RPT1P33299 YMR160WYMR160W 2451 nt0.86□□□□□ -2.27
RPT1P33299 tQ(UUG)QtQ(UUG)Q 76 nt0.83□□□□□ -2.28
RPT1P33299 ORC3YLL004W 1851 nt0.82□□□□□ -2.28
RPT1P33299 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
RPT1P33299 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
RPT1P33299 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
RPT1P33299 YBL100W-BYBL100W-B 5313 nt0.81□□□□□ -2.28
RPT1P33299 YLL066W-BYLL066W-B 171 nt0.8□□□□□ -2.28
RPT1P33299 MLP2YIL149C 5040 nt0.77□□□□□ -2.29
RPT1P33299 YGR240C-AYGR240C-A 201 nt0.77□□□□□ -2.29
RPT1P33299 YOL014WYOL014W 375 nt0.76□□□□□ -2.29
RPT1P33299 snR45snR45 172 nt0.76□□□□□ -2.29
RPT1P33299 YKL145W-AYKL145W-A 93 nt0.74□□□□□ -2.29
RPT1P33299 YER090C-AYER090C-A 90 nt0.73□□□□□ -2.29
RPT1P33299 YOR186C-AYOR186C-A 210 nt0.72□□□□□ -2.29
RPT1P33299 YDR034C-AYDR034C-A 177 nt0.68□□□□□ -2.3
RPT1P33299 FMP27YLR454W 7887 nt0.68□□□□□ -2.3
RPT1P33299 snR47snR47 99 nt0.66□□□□□ -2.3
RPT1P33299 YHR180C-BYHR180C-B 105 nt0.64□□□□□ -2.31
RPT1P33299 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
RPT1P33299 MYO1YHR023W 5787 nt0.62□□□□□ -2.31
RPT1P33299 YML054C-AYML054C-A 159 nt0.61□□□□□ -2.31
RPT1P33299 AI1Q0050 2505 nt0.61□□□□□ -2.31
RPT1P33299 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
RPT1P33299 snR50snR50 90 nt0.6□□□□□ -2.31
RPT1P33299 RPL41AYDL184C 78 nt0.51□□□□□ -2.33
RPT1P33299 snR67snR67 82 nt0.5□□□□□ -2.33
RPT1P33299 YBR109W-AYBR109W-A 225 nt0.5□□□□□ -2.33
RPT1P33299 YBR296C-AYBR296C-A 120 nt0.5□□□□□ -2.33
RPT1P33299 ESP1YGR098C 4893 nt0.46□□□□□ -2.34
RPT1P33299 SOV1YMR066W 2697 nt0.43□□□□□ -2.34
RPT1P33299 YKL225WYKL225W 348 nt0.4□□□□□ -2.35
RPT1P33299 YOL013W-AYOL013W-A 192 nt0.39□□□□□ -2.35
RPT1P33299 YML100W-AYML100W-A 174 nt0.38□□□□□ -2.35
RPT1P33299 THO2YNL139C 4794 nt0.36□□□□□ -2.35
RPT1P33299 snR38snR38 95 nt0.35□□□□□ -2.35
RPT1P33299 snR64snR64 101 nt0.33□□□□□ -2.36
RPT1P33299 YER078W-AYER078W-A 165 nt0.33□□□□□ -2.36
RPT1P33299 snR128snR128 126 nt0.29□□□□□ -2.36
RPT1P33299 snR53snR53 91 nt0.25□□□□□ -2.37
RPT1P33299 SKI7YOR076C 2244 nt0.17□□□□□ -2.38
RPT1P33299 YKL106C-AYKL106C-A 120 nt0.02□□□□□ -2.41
RPT1P33299 PAU9YBL108C-A 129 nt0.01□□□□□ -2.41
RPT1P33299 YJL113WYJL113W 4647 nt0.01□□□□□ -2.41
RPT1P33299 YDL159W-AYDL159W-A 132 nt-0.06□□□□□ -2.42
RPT1P33299 tA(UGC)QtA(UGC)Q 76 nt-0.07□□□□□ -2.42
RPT1P33299 YGR122C-AYGR122C-A 129 nt-0.1□□□□□ -2.43
RPT1P33299 SBH2YER019C-A 267 nt-0.14□□□□□ -2.43
RPT1P33299 YOR376W-AYOR376W-A 156 nt-0.16□□□□□ -2.44
RPT1P33299 YOR316C-AYOR316C-A 210 nt-0.2□□□□□ -2.44
RPT1P33299 YLR149C-AYLR149C-A 87 nt-0.25□□□□□ -2.45
RPT1P33299 YDL114W-AYDL114W-A 114 nt-0.31□□□□□ -2.46
RPT1P33299 YHL009W-BYHL009W-B 5409 nt-0.35□□□□□ -2.47
RPT1P33299 tV(UAC)QtV(UAC)Q 76 nt-0.38□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 61.1 ms