Protein–RNA interactions for Protein: P31379

LDS1, Outer spore wall protein LDS1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDS1P31379 snR128snR128 126 nt-0.05□□□□□ -2.42
LDS1P31379 tM(CAU)Q1tM(CAU)Q1 76 nt-0.06□□□□□ -2.42
LDS1P31379 YHL015W-AYHL015W-A 84 nt-0.06□□□□□ -2.42
LDS1P31379 YBL053WYBL053W 375 nt-0.06□□□□□ -2.42
LDS1P31379 YDL007C-AYDL007C-A 258 nt-0.07□□□□□ -2.42
LDS1P31379 YGR164WYGR164W 336 nt-0.07□□□□□ -2.42
LDS1P31379 YNL198CYNL198C 303 nt-0.07□□□□□ -2.42
LDS1P31379 YOR102WYOR102W 351 nt-0.07□□□□□ -2.42
LDS1P31379 snR69snR69 101 nt-0.09□□□□□ -2.42
LDS1P31379 YNL067W-BYNL067W-B 141 nt-0.11□□□□□ -2.43
LDS1P31379 YJL077W-AYJL077W-A 87 nt-0.12□□□□□ -2.43
LDS1P31379 PMP2YEL017C-A 132 nt-0.13□□□□□ -2.43
LDS1P31379 tF(GAA)BtF(GAA)B 73 nt-0.16□□□□□ -2.44
LDS1P31379 tF(GAA)FtF(GAA)F 73 nt-0.16□□□□□ -2.44
LDS1P31379 tF(GAA)GtF(GAA)G 73 nt-0.16□□□□□ -2.44
LDS1P31379 tF(GAA)H1tF(GAA)H1 73 nt-0.16□□□□□ -2.44
LDS1P31379 tF(GAA)H2tF(GAA)H2 73 nt-0.16□□□□□ -2.44
LDS1P31379 tF(GAA)MtF(GAA)M 73 nt-0.16□□□□□ -2.44
LDS1P31379 tF(GAA)P1tF(GAA)P1 73 nt-0.16□□□□□ -2.44
LDS1P31379 tF(GAA)P2tF(GAA)P2 73 nt-0.16□□□□□ -2.44
LDS1P31379 tQ(UUG)QtQ(UUG)Q 76 nt-0.17□□□□□ -2.44
LDS1P31379 STF2YGR008C 255 nt-0.18□□□□□ -2.44
LDS1P31379 YLR466C-BYLR466C-B 117 nt-0.19□□□□□ -2.44
LDS1P31379 YNL205CYNL205C 423 nt-0.2□□□□□ -2.44
LDS1P31379 RDS3YPR094W 324 nt-0.2□□□□□ -2.44
LDS1P31379 YER078W-AYER078W-A 165 nt-0.21□□□□□ -2.44
LDS1P31379 snR45snR45 172 nt-0.21□□□□□ -2.44
LDS1P31379 SEC10YLR166C 2616 nt-0.23□□□□□ -2.45
LDS1P31379 YGR151CYGR151C 336 nt-0.23□□□□□ -2.45
LDS1P31379 YML100W-AYML100W-A 174 nt-0.23□□□□□ -2.45
LDS1P31379 tD(GUC)QtD(GUC)Q 75 nt-0.25□□□□□ -2.45
LDS1P31379 snR50snR50 90 nt-0.25□□□□□ -2.45
LDS1P31379 YER090C-AYER090C-A 90 nt-0.26□□□□□ -2.45
LDS1P31379 YBR178WYBR178W 375 nt-0.26□□□□□ -2.45
LDS1P31379 YOL014WYOL014W 375 nt-0.27□□□□□ -2.45
LDS1P31379 YNL266WYNL266W 420 nt-0.28□□□□□ -2.45
LDS1P31379 YNL338WYNL338W 159 nt-0.29□□□□□ -2.46
LDS1P31379 SBH2YER019C-A 267 nt-0.3□□□□□ -2.46
LDS1P31379 YLR286W-AYLR286W-A 135 nt-0.32□□□□□ -2.46
LDS1P31379 YNL337WYNL337W 255 nt-0.34□□□□□ -2.46
LDS1P31379 YDL159C-BYDL159C-B 177 nt-0.36□□□□□ -2.47
LDS1P31379 SOM1YEL059C-A 225 nt-0.36□□□□□ -2.47
LDS1P31379 YIL071W-AYIL071W-A 477 nt-0.36□□□□□ -2.47
LDS1P31379 YBR196C-AYBR196C-A 150 nt-0.4□□□□□ -2.47
LDS1P31379 TFB5YDR079C-A 219 nt-0.41□□□□□ -2.48
LDS1P31379 PAU9YBL108C-A 129 nt-0.41□□□□□ -2.48
LDS1P31379 tA(UGC)QtA(UGC)Q 76 nt-0.42□□□□□ -2.48
LDS1P31379 YCR095W-AYCR095W-A 159 nt-0.43□□□□□ -2.48
LDS1P31379 YGL007C-AYGL007C-A 87 nt-0.43□□□□□ -2.48
LDS1P31379 Q0032Q0032 291 nt-0.45□□□□□ -2.48
LDS1P31379 YLR299C-AYLR299C-A 93 nt-0.46□□□□□ -2.48
LDS1P31379 snR67snR67 82 nt-0.47□□□□□ -2.48
LDS1P31379 YCL001W-BYCL001W-B 255 nt-0.48□□□□□ -2.49
LDS1P31379 SKI7YOR076C 2244 nt-0.53□□□□□ -2.49
LDS1P31379 YOR225WYOR225W 330 nt-0.57□□□□□ -2.5
LDS1P31379 YJL113WYJL113W 4647 nt-0.58□□□□□ -2.5
LDS1P31379 YML054C-AYML054C-A 159 nt-0.59□□□□□ -2.5
LDS1P31379 URB1YKL014C 5295 nt-0.61□□□□□ -2.51
LDS1P31379 YLR294CYLR294C 330 nt-0.65□□□□□ -2.51
LDS1P31379 YHR180C-BYHR180C-B 105 nt-0.7□□□□□ -2.52
LDS1P31379 YOL083C-AYOL083C-A 141 nt-0.71□□□□□ -2.52
LDS1P31379 YBL071C-BYBL071C-B 99 nt-0.72□□□□□ -2.52
LDS1P31379 snR161snR161 161 nt-0.76□□□□□ -2.53
LDS1P31379 snR33snR33 183 nt-0.79□□□□□ -2.54
LDS1P31379 YAL037C-AYAL037C-A 93 nt-0.8□□□□□ -2.54
LDS1P31379 snR81snR81 201 nt-0.81□□□□□ -2.54
LDS1P31379 YHL009W-BYHL009W-B 5409 nt-0.82□□□□□ -2.54
LDS1P31379 YOL164W-AYOL164W-A 183 nt-0.82□□□□□ -2.54
LDS1P31379 YBR109W-AYBR109W-A 225 nt-0.83□□□□□ -2.54
LDS1P31379 YNL170WYNL170W 396 nt-0.87□□□□□ -2.55
LDS1P31379 YOR376W-AYOR376W-A 156 nt-0.89□□□□□ -2.55
LDS1P31379 RPL41AYDL184C 78 nt-0.9□□□□□ -2.55
LDS1P31379 snR38snR38 95 nt-0.9□□□□□ -2.55
LDS1P31379 YBR296C-AYBR296C-A 120 nt-0.9□□□□□ -2.55
LDS1P31379 YNL103W-AYNL103W-A 90 nt-0.93□□□□□ -2.56
LDS1P31379 snR47snR47 99 nt-0.93□□□□□ -2.56
LDS1P31379 tT(UGU)G1tT(UGU)G1 72 nt-0.95□□□□□ -2.56
LDS1P31379 tT(UGU)G2tT(UGU)G2 72 nt-0.95□□□□□ -2.56
LDS1P31379 tT(UGU)PtT(UGU)P 72 nt-0.95□□□□□ -2.56
LDS1P31379 ATP8Q0080 147 nt-0.97□□□□□ -2.56
LDS1P31379 YGR240C-AYGR240C-A 201 nt-0.97□□□□□ -2.56
LDS1P31379 YGL041C-BYGL041C-B 183 nt-0.98□□□□□ -2.57
LDS1P31379 YKL106C-AYKL106C-A 120 nt-1□□□□□ -2.57
LDS1P31379 YBL100W-CYBL100W-C 120 nt-1□□□□□ -2.57
LDS1P31379 snR61snR61 90 nt-1.01□□□□□ -2.57
LDS1P31379 tP(UGG)QtP(UGG)Q 72 nt-1.03□□□□□ -2.57
LDS1P31379 snR77snR77 88 nt-1.06□□□□□ -2.58
LDS1P31379 tS(GCU)Q1tS(GCU)Q1 86 nt-1.06□□□□□ -2.58
LDS1P31379 YOR316C-AYOR316C-A 210 nt-1.08□□□□□ -2.58
LDS1P31379 CDC65tQ(CUG)M 72 nt-1.11□□□□□ -2.59
LDS1P31379 YKL225WYKL225W 348 nt-1.17□□□□□ -2.6
LDS1P31379 Q0092Q0092 141 nt-1.2□□□□□ -2.6
LDS1P31379 YDR034C-AYDR034C-A 177 nt-1.22□□□□□ -2.6
LDS1P31379 snR62snR62 100 nt-1.25□□□□□ -2.61
LDS1P31379 YBR223W-AYBR223W-A 120 nt-1.27□□□□□ -2.61
LDS1P31379 Q0143Q0143 153 nt-1.28□□□□□ -2.61
LDS1P31379 YMR315W-AYMR315W-A 108 nt-1.28□□□□□ -2.61
LDS1P31379 YDL159W-AYDL159W-A 132 nt-1.46□□□□□ -2.64
LDS1P31379 YMR326CYMR326C 309 nt-1.47□□□□□ -2.64
LDS1P31379 YDL114W-AYDL114W-A 114 nt-1.48□□□□□ -2.65
Retrieved 100 of 7,029 protein–RNA pairs in 88 ms