Protein–RNA interactions for Protein: P25515

VMA3, V-type proton ATPase subunit c, yeastyeast

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA3P25515 YKL225WYKL225W 348 nt1.28□□□□□ -2.2
VMA3P25515 YML054C-AYML054C-A 159 nt1.28□□□□□ -2.2
VMA3P25515 snR50snR50 90 nt1.26□□□□□ -2.21
VMA3P25515 CCH1YGR217W 6120 nt1.26□□□□□ -2.21
VMA3P25515 tQ(UUG)E2tQ(UUG)E2 72 nt1.25□□□□□ -2.21
VMA3P25515 tQ(UUG)QtQ(UUG)Q 76 nt1.25□□□□□ -2.21
VMA3P25515 RPL41AYDL184C 78 nt1.24□□□□□ -2.21
VMA3P25515 YBR109W-AYBR109W-A 225 nt1.23□□□□□ -2.21
VMA3P25515 YNL284C-BYNL284C-B 5268 nt1.23□□□□□ -2.21
VMA3P25515 HKR1YDR420W 5409 nt1.22□□□□□ -2.21
VMA3P25515 YBR296C-AYBR296C-A 120 nt1.21□□□□□ -2.22
VMA3P25515 RKR1YMR247C 4689 nt1.2□□□□□ -2.22
VMA3P25515 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
VMA3P25515 YPR117WYPR117W 7470 nt1.16□□□□□ -2.22
VMA3P25515 LTE1YAL024C 4308 nt1.15□□□□□ -2.22
VMA3P25515 YOR192C-BYOR192C-B 5313 nt1.15□□□□□ -2.23
VMA3P25515 YER090C-AYER090C-A 90 nt1.12□□□□□ -2.23
VMA3P25515 FIG2YCR089W 4830 nt1.11□□□□□ -2.23
VMA3P25515 YDR371C-AYDR371C-A 105 nt1.1□□□□□ -2.23
VMA3P25515 snR38snR38 95 nt1.1□□□□□ -2.23
VMA3P25515 PET111YMR257C 2403 nt1.1□□□□□ -2.23
VMA3P25515 tH(GUG)E1tH(GUG)E1 72 nt1.07□□□□□ -2.24
VMA3P25515 tH(GUG)E2tH(GUG)E2 72 nt1.07□□□□□ -2.24
VMA3P25515 tH(GUG)G1tH(GUG)G1 72 nt1.07□□□□□ -2.24
VMA3P25515 tH(GUG)G2tH(GUG)G2 72 nt1.07□□□□□ -2.24
VMA3P25515 tH(GUG)HtH(GUG)H 72 nt1.07□□□□□ -2.24
VMA3P25515 tH(GUG)KtH(GUG)K 72 nt1.07□□□□□ -2.24
VMA3P25515 tH(GUG)MtH(GUG)M 72 nt1.07□□□□□ -2.24
VMA3P25515 AI1Q0050 2505 nt1.05□□□□□ -2.24
VMA3P25515 MYO1YHR023W 5787 nt1.04□□□□□ -2.24
VMA3P25515 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
VMA3P25515 IML1YJR138W 4755 nt1.03□□□□□ -2.25
VMA3P25515 SKI7YOR076C 2244 nt1.02□□□□□ -2.25
VMA3P25515 BUD3YCL014W 4911 nt1.01□□□□□ -2.25
VMA3P25515 PAU24YBR301W 363 nt1□□□□□ -2.25
VMA3P25515 YNL054W-BYNL054W-B 5250 nt0.97□□□□□ -2.25
VMA3P25515 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
VMA3P25515 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
VMA3P25515 snR67snR67 82 nt0.96□□□□□ -2.26
VMA3P25515 tV(UAC)BtV(UAC)B 74 nt0.96□□□□□ -2.26
VMA3P25515 tV(UAC)DtV(UAC)D 74 nt0.96□□□□□ -2.26
VMA3P25515 DOP1YDR141C 5097 nt0.96□□□□□ -2.26
VMA3P25515 MLP2YIL149C 5040 nt0.96□□□□□ -2.26
VMA3P25515 MLP1YKR095W 5628 nt0.95□□□□□ -2.26
VMA3P25515 YDL159W-AYDL159W-A 132 nt0.94□□□□□ -2.26
VMA3P25515 YLR149C-AYLR149C-A 87 nt0.92□□□□□ -2.26
VMA3P25515 YBL100W-BYBL100W-B 5313 nt0.91□□□□□ -2.26
VMA3P25515 BEM2YER155C 6504 nt0.91□□□□□ -2.26
VMA3P25515 EMT1tM(CAU)D 73 nt0.89□□□□□ -2.27
VMA3P25515 EMT5tM(CAU)J1 73 nt0.89□□□□□ -2.27
VMA3P25515 EMT3tM(CAU)J2 73 nt0.89□□□□□ -2.27
VMA3P25515 EMT4tM(CAU)M 73 nt0.89□□□□□ -2.27
VMA3P25515 EMT2tM(CAU)O2 73 nt0.89□□□□□ -2.27
VMA3P25515 YGR122C-AYGR122C-A 129 nt0.88□□□□□ -2.27
VMA3P25515 YKL096C-BYKL096C-B 150 nt0.85□□□□□ -2.27
VMA3P25515 YMR160WYMR160W 2451 nt0.83□□□□□ -2.28
VMA3P25515 YOR186C-AYOR186C-A 210 nt0.8□□□□□ -2.28
VMA3P25515 IQG1YPL242C 4488 nt0.79□□□□□ -2.28
VMA3P25515 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
VMA3P25515 YKL106C-AYKL106C-A 120 nt0.66□□□□□ -2.3
VMA3P25515 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
VMA3P25515 YML100W-AYML100W-A 174 nt0.62□□□□□ -2.31
VMA3P25515 tT(AGU)BtT(AGU)B 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)CtT(AGU)C 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)DtT(AGU)D 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)HtT(AGU)H 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)I1tT(AGU)I1 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)I2tT(AGU)I2 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)JtT(AGU)J 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)N1tT(AGU)N1 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)N2tT(AGU)N2 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)O1tT(AGU)O1 73 nt0.61□□□□□ -2.31
VMA3P25515 tT(AGU)O2tT(AGU)O2 73 nt0.61□□□□□ -2.31
VMA3P25515 UTP20YBL004W 7482 nt0.59□□□□□ -2.31
VMA3P25515 snR75snR75 89 nt0.59□□□□□ -2.31
VMA3P25515 YER078W-AYER078W-A 165 nt0.56□□□□□ -2.32
VMA3P25515 YMR272W-AYMR272W-A 114 nt0.53□□□□□ -2.32
VMA3P25515 SOV1YMR066W 2697 nt0.52□□□□□ -2.33
VMA3P25515 YDL114W-AYDL114W-A 114 nt0.5□□□□□ -2.33
VMA3P25515 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
VMA3P25515 FMP27YLR454W 7887 nt0.42□□□□□ -2.34
VMA3P25515 snR128snR128 126 nt0.42□□□□□ -2.34
VMA3P25515 THO2YNL139C 4794 nt0.41□□□□□ -2.34
VMA3P25515 tV(UAC)QtV(UAC)Q 76 nt0.4□□□□□ -2.35
VMA3P25515 YOL013W-AYOL013W-A 192 nt0.4□□□□□ -2.35
VMA3P25515 YOR376W-AYOR376W-A 156 nt0.39□□□□□ -2.35
VMA3P25515 tF(GAA)BtF(GAA)B 73 nt0.35□□□□□ -2.35
VMA3P25515 tF(GAA)FtF(GAA)F 73 nt0.35□□□□□ -2.35
VMA3P25515 tF(GAA)GtF(GAA)G 73 nt0.35□□□□□ -2.35
VMA3P25515 tF(GAA)H1tF(GAA)H1 73 nt0.35□□□□□ -2.35
VMA3P25515 tF(GAA)H2tF(GAA)H2 73 nt0.35□□□□□ -2.35
VMA3P25515 tF(GAA)MtF(GAA)M 73 nt0.35□□□□□ -2.35
VMA3P25515 tF(GAA)P1tF(GAA)P1 73 nt0.35□□□□□ -2.35
VMA3P25515 tF(GAA)P2tF(GAA)P2 73 nt0.35□□□□□ -2.35
VMA3P25515 YOR316C-AYOR316C-A 210 nt0.34□□□□□ -2.36
VMA3P25515 PAU9YBL108C-A 129 nt0.33□□□□□ -2.36
VMA3P25515 YKL145W-AYKL145W-A 93 nt0.3□□□□□ -2.36
VMA3P25515 SBH2YER019C-A 267 nt0.26□□□□□ -2.37
VMA3P25515 snR77snR77 88 nt0.23□□□□□ -2.37
VMA3P25515 YOL014WYOL014W 375 nt0.22□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms