Protein–RNA interactions for Protein: P25040

TSR4, 20S rRNA accumulation protein 4, yeastyeast

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TSR4P25040 UBP3YER151C 2739 nt1.01□□□□□ -2.25
TSR4P25040 YDL247W-AYDL247W-A 75 nt1□□□□□ -2.25
TSR4P25040 YBL071C-BYBL071C-B 99 nt0.95□□□□□ -2.26
TSR4P25040 BUL2YML111W 2763 nt0.95□□□□□ -2.26
TSR4P25040 YOR192C-BYOR192C-B 5313 nt0.94□□□□□ -2.26
TSR4P25040 MLP1YKR095W 5628 nt0.94□□□□□ -2.26
TSR4P25040 YIL142C-AYIL142C-A 333 nt0.93□□□□□ -2.26
TSR4P25040 YOL083C-AYOL083C-A 141 nt0.93□□□□□ -2.26
TSR4P25040 YAL037C-AYAL037C-A 93 nt0.92□□□□□ -2.26
TSR4P25040 snR45snR45 172 nt0.92□□□□□ -2.26
TSR4P25040 RPS26AYGL189C 360 nt0.91□□□□□ -2.26
TSR4P25040 SEC10YLR166C 2616 nt0.91□□□□□ -2.26
TSR4P25040 EST1YLR233C 2100 nt0.91□□□□□ -2.26
TSR4P25040 tF(GAA)BtF(GAA)B 73 nt0.9□□□□□ -2.27
TSR4P25040 tF(GAA)FtF(GAA)F 73 nt0.9□□□□□ -2.27
TSR4P25040 tF(GAA)GtF(GAA)G 73 nt0.9□□□□□ -2.27
TSR4P25040 tF(GAA)H1tF(GAA)H1 73 nt0.9□□□□□ -2.27
TSR4P25040 tF(GAA)H2tF(GAA)H2 73 nt0.9□□□□□ -2.27
TSR4P25040 tF(GAA)MtF(GAA)M 73 nt0.9□□□□□ -2.27
TSR4P25040 tF(GAA)P1tF(GAA)P1 73 nt0.9□□□□□ -2.27
TSR4P25040 tF(GAA)P2tF(GAA)P2 73 nt0.9□□□□□ -2.27
TSR4P25040 GLG1YKR058W 1851 nt0.9□□□□□ -2.27
TSR4P25040 YLL006W-AYLL006W-A 177 nt0.89□□□□□ -2.27
TSR4P25040 YLL066W-BYLL066W-B 171 nt0.89□□□□□ -2.27
TSR4P25040 YPR159C-AYPR159C-A 102 nt0.88□□□□□ -2.27
TSR4P25040 MLP2YIL149C 5040 nt0.88□□□□□ -2.27
TSR4P25040 YBR196C-AYBR196C-A 150 nt0.86□□□□□ -2.27
TSR4P25040 UTP20YBL004W 7482 nt0.86□□□□□ -2.27
TSR4P25040 CSE1YGL238W 2883 nt0.84□□□□□ -2.27
TSR4P25040 YLR286W-AYLR286W-A 135 nt0.84□□□□□ -2.27
TSR4P25040 NIP1YMR309C 2439 nt0.84□□□□□ -2.28
TSR4P25040 tD(GUC)QtD(GUC)Q 75 nt0.82□□□□□ -2.28
TSR4P25040 YOL164W-AYOL164W-A 183 nt0.82□□□□□ -2.28
TSR4P25040 snR69snR69 101 nt0.81□□□□□ -2.28
TSR4P25040 ORC3YLL004W 1851 nt0.81□□□□□ -2.28
TSR4P25040 snR62snR62 100 nt0.8□□□□□ -2.28
TSR4P25040 PET111YMR257C 2403 nt0.8□□□□□ -2.28
TSR4P25040 YDR371C-AYDR371C-A 105 nt0.78□□□□□ -2.28
TSR4P25040 YOL014WYOL014W 375 nt0.76□□□□□ -2.29
TSR4P25040 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
TSR4P25040 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
TSR4P25040 YDR034C-AYDR034C-A 177 nt0.73□□□□□ -2.29
TSR4P25040 YDL159C-BYDL159C-B 177 nt0.72□□□□□ -2.29
TSR4P25040 YMR160WYMR160W 2451 nt0.72□□□□□ -2.29
TSR4P25040 YGR240C-AYGR240C-A 201 nt0.71□□□□□ -2.3
TSR4P25040 RDS3YPR094W 324 nt0.71□□□□□ -2.3
TSR4P25040 snR47snR47 99 nt0.71□□□□□ -2.3
TSR4P25040 YLR299C-AYLR299C-A 93 nt0.7□□□□□ -2.3
TSR4P25040 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
TSR4P25040 YKL145W-AYKL145W-A 93 nt0.68□□□□□ -2.3
TSR4P25040 YBL100W-BYBL100W-B 5313 nt0.68□□□□□ -2.3
TSR4P25040 tQ(UUG)QtQ(UUG)Q 76 nt0.64□□□□□ -2.31
TSR4P25040 YML054C-AYML054C-A 159 nt0.62□□□□□ -2.31
TSR4P25040 snR50snR50 90 nt0.62□□□□□ -2.31
TSR4P25040 YJL077W-AYJL077W-A 87 nt0.61□□□□□ -2.31
TSR4P25040 YBL100W-CYBL100W-C 120 nt0.6□□□□□ -2.31
TSR4P25040 YBR109W-AYBR109W-A 225 nt0.59□□□□□ -2.31
TSR4P25040 YER090C-AYER090C-A 90 nt0.58□□□□□ -2.32
TSR4P25040 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
TSR4P25040 snR38snR38 95 nt0.57□□□□□ -2.32
TSR4P25040 FMP27YLR454W 7887 nt0.56□□□□□ -2.32
TSR4P25040 YHR180C-BYHR180C-B 105 nt0.53□□□□□ -2.32
TSR4P25040 ESP1YGR098C 4893 nt0.53□□□□□ -2.33
TSR4P25040 AI1Q0050 2505 nt0.52□□□□□ -2.33
TSR4P25040 THO2YNL139C 4794 nt0.5□□□□□ -2.33
TSR4P25040 YOR186C-AYOR186C-A 210 nt0.5□□□□□ -2.33
TSR4P25040 YKL225WYKL225W 348 nt0.49□□□□□ -2.33
TSR4P25040 snR64snR64 101 nt0.47□□□□□ -2.33
TSR4P25040 RPL41AYDL184C 78 nt0.46□□□□□ -2.34
TSR4P25040 SOV1YMR066W 2697 nt0.44□□□□□ -2.34
TSR4P25040 YBR296C-AYBR296C-A 120 nt0.43□□□□□ -2.34
TSR4P25040 YDL159W-AYDL159W-A 132 nt0.4□□□□□ -2.35
TSR4P25040 snR53snR53 91 nt0.39□□□□□ -2.35
TSR4P25040 YER078W-AYER078W-A 165 nt0.37□□□□□ -2.35
TSR4P25040 YOL013W-AYOL013W-A 192 nt0.37□□□□□ -2.35
TSR4P25040 snR67snR67 82 nt0.36□□□□□ -2.35
TSR4P25040 SKI7YOR076C 2244 nt0.34□□□□□ -2.35
TSR4P25040 YML100W-AYML100W-A 174 nt0.32□□□□□ -2.36
TSR4P25040 YGR122C-AYGR122C-A 129 nt0.18□□□□□ -2.38
TSR4P25040 snR128snR128 126 nt0.18□□□□□ -2.38
TSR4P25040 YLR149C-AYLR149C-A 87 nt0.16□□□□□ -2.38
TSR4P25040 YOR376W-AYOR376W-A 156 nt0.12□□□□□ -2.39
TSR4P25040 YKL106C-AYKL106C-A 120 nt0.11□□□□□ -2.39
TSR4P25040 PAU9YBL108C-A 129 nt0.06□□□□□ -2.4
TSR4P25040 YJL113WYJL113W 4647 nt-0.01□□□□□ -2.41
TSR4P25040 tA(UGC)QtA(UGC)Q 76 nt-0.01□□□□□ -2.41
TSR4P25040 tV(UAC)QtV(UAC)Q 76 nt-0.01□□□□□ -2.41
TSR4P25040 YDL114W-AYDL114W-A 114 nt-0.05□□□□□ -2.42
TSR4P25040 YOR316C-AYOR316C-A 210 nt-0.07□□□□□ -2.42
TSR4P25040 YKL096C-BYKL096C-B 150 nt-0.12□□□□□ -2.43
TSR4P25040 snR77snR77 88 nt-0.14□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms