Protein–RNA interactions for Protein: P23642

VAN1, Mannan polymerase I complex VAN1 subunit, yeastyeast

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAN1P23642 SIP4YJL089W 2490 nt1.32□□□□□ -2.2
VAN1P23642 BUD3YCL014W 4911 nt1.32□□□□□ -2.2
VAN1P23642 YPR117WYPR117W 7470 nt1.32□□□□□ -2.2
VAN1P23642 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
VAN1P23642 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
VAN1P23642 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
VAN1P23642 tH(GUG)G2tH(GUG)G2 72 nt1.3□□□□□ -2.2
VAN1P23642 tH(GUG)HtH(GUG)H 72 nt1.3□□□□□ -2.2
VAN1P23642 tH(GUG)KtH(GUG)K 72 nt1.3□□□□□ -2.2
VAN1P23642 tH(GUG)MtH(GUG)M 72 nt1.3□□□□□ -2.2
VAN1P23642 PAU12YGR294W 363 nt1.29□□□□□ -2.2
VAN1P23642 RKR1YMR247C 4689 nt1.29□□□□□ -2.2
VAN1P23642 SCC2YDR180W 4482 nt1.28□□□□□ -2.2
VAN1P23642 snR53snR53 91 nt1.26□□□□□ -2.21
VAN1P23642 snR64snR64 101 nt1.24□□□□□ -2.21
VAN1P23642 YML054C-AYML054C-A 159 nt1.22□□□□□ -2.21
VAN1P23642 LTE1YAL024C 4308 nt1.21□□□□□ -2.22
VAN1P23642 YOR192C-BYOR192C-B 5313 nt1.2□□□□□ -2.22
VAN1P23642 YHR180C-BYHR180C-B 105 nt1.19□□□□□ -2.22
VAN1P23642 tQ(UUG)QtQ(UUG)Q 76 nt1.17□□□□□ -2.22
VAN1P23642 tV(UAC)BtV(UAC)B 74 nt1.17□□□□□ -2.22
VAN1P23642 tV(UAC)DtV(UAC)D 74 nt1.17□□□□□ -2.22
VAN1P23642 YBR109W-AYBR109W-A 225 nt1.17□□□□□ -2.22
VAN1P23642 IML1YJR138W 4755 nt1.16□□□□□ -2.22
VAN1P23642 YNL054W-BYNL054W-B 5250 nt1.16□□□□□ -2.22
VAN1P23642 YKL225WYKL225W 348 nt1.16□□□□□ -2.22
VAN1P23642 BEM2YER155C 6504 nt1.15□□□□□ -2.22
VAN1P23642 YDR371C-AYDR371C-A 105 nt1.14□□□□□ -2.23
VAN1P23642 RPL41AYDL184C 78 nt1.11□□□□□ -2.23
VAN1P23642 PET111YMR257C 2403 nt1.1□□□□□ -2.23
VAN1P23642 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
VAN1P23642 YER090C-AYER090C-A 90 nt1.09□□□□□ -2.23
VAN1P23642 YBR296C-AYBR296C-A 120 nt1.09□□□□□ -2.23
VAN1P23642 VAM6YDL077C 3150 nt1.09□□□□□ -2.24
VAN1P23642 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
VAN1P23642 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
VAN1P23642 PAU24YBR301W 363 nt1.06□□□□□ -2.24
VAN1P23642 snR38snR38 95 nt1.05□□□□□ -2.24
VAN1P23642 snR50snR50 90 nt1.04□□□□□ -2.24
VAN1P23642 YBL100W-BYBL100W-B 5313 nt1.02□□□□□ -2.25
VAN1P23642 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
VAN1P23642 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
VAN1P23642 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
VAN1P23642 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
VAN1P23642 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
VAN1P23642 AI1Q0050 2505 nt1□□□□□ -2.25
VAN1P23642 MLP1YKR095W 5628 nt0.98□□□□□ -2.25
VAN1P23642 IQG1YPL242C 4488 nt0.96□□□□□ -2.26
VAN1P23642 MYO1YHR023W 5787 nt0.95□□□□□ -2.26
VAN1P23642 snR67snR67 82 nt0.88□□□□□ -2.27
VAN1P23642 YMR160WYMR160W 2451 nt0.86□□□□□ -2.27
VAN1P23642 MLP2YIL149C 5040 nt0.85□□□□□ -2.27
VAN1P23642 SKI7YOR076C 2244 nt0.84□□□□□ -2.27
VAN1P23642 YDL159W-AYDL159W-A 132 nt0.81□□□□□ -2.28
VAN1P23642 YOR186C-AYOR186C-A 210 nt0.77□□□□□ -2.29
VAN1P23642 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
VAN1P23642 YLR149C-AYLR149C-A 87 nt0.75□□□□□ -2.29
VAN1P23642 YGR122C-AYGR122C-A 129 nt0.72□□□□□ -2.29
VAN1P23642 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
VAN1P23642 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
VAN1P23642 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
VAN1P23642 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
VAN1P23642 tF(GAA)BtF(GAA)B 73 nt0.63□□□□□ -2.31
VAN1P23642 tF(GAA)FtF(GAA)F 73 nt0.63□□□□□ -2.31
VAN1P23642 tF(GAA)GtF(GAA)G 73 nt0.63□□□□□ -2.31
VAN1P23642 tF(GAA)H1tF(GAA)H1 73 nt0.63□□□□□ -2.31
VAN1P23642 tF(GAA)H2tF(GAA)H2 73 nt0.63□□□□□ -2.31
VAN1P23642 tF(GAA)MtF(GAA)M 73 nt0.63□□□□□ -2.31
VAN1P23642 tF(GAA)P1tF(GAA)P1 73 nt0.63□□□□□ -2.31
VAN1P23642 tF(GAA)P2tF(GAA)P2 73 nt0.63□□□□□ -2.31
VAN1P23642 YML100W-AYML100W-A 174 nt0.63□□□□□ -2.31
VAN1P23642 ESP1YGR098C 4893 nt0.62□□□□□ -2.31
VAN1P23642 SOV1YMR066W 2697 nt0.61□□□□□ -2.31
VAN1P23642 YKL096C-BYKL096C-B 150 nt0.61□□□□□ -2.31
VAN1P23642 UTP20YBL004W 7482 nt0.61□□□□□ -2.31
VAN1P23642 FMP27YLR454W 7887 nt0.56□□□□□ -2.32
VAN1P23642 YKL145W-AYKL145W-A 93 nt0.54□□□□□ -2.32
VAN1P23642 YKL106C-AYKL106C-A 120 nt0.53□□□□□ -2.32
VAN1P23642 YOL014WYOL014W 375 nt0.49□□□□□ -2.33
VAN1P23642 YOL013W-AYOL013W-A 192 nt0.42□□□□□ -2.34
VAN1P23642 snR128snR128 126 nt0.38□□□□□ -2.35
VAN1P23642 THO2YNL139C 4794 nt0.36□□□□□ -2.35
VAN1P23642 YDL114W-AYDL114W-A 114 nt0.35□□□□□ -2.35
VAN1P23642 YOR376W-AYOR376W-A 156 nt0.33□□□□□ -2.36
VAN1P23642 tV(UAC)QtV(UAC)Q 76 nt0.3□□□□□ -2.36
VAN1P23642 YER078W-AYER078W-A 165 nt0.29□□□□□ -2.36
VAN1P23642 snR75snR75 89 nt0.27□□□□□ -2.37
VAN1P23642 YOR316C-AYOR316C-A 210 nt0.24□□□□□ -2.37
VAN1P23642 PAU9YBL108C-A 129 nt0.23□□□□□ -2.37
VAN1P23642 SBH2YER019C-A 267 nt0.14□□□□□ -2.39
VAN1P23642 snR77snR77 88 nt0.1□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms