Protein–RNA interactions for Protein: P22543

VPS34, Phosphatidylinositol 3-kinase VPS34, yeastyeast

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS34P22543 YDR034C-AYDR034C-A 177 nt1.08□□□□□ -2.24
VPS34P22543 YLR286W-AYLR286W-A 135 nt1.07□□□□□ -2.24
VPS34P22543 GLG1YKR058W 1851 nt1.07□□□□□ -2.24
VPS34P22543 RKR1YMR247C 4689 nt1.05□□□□□ -2.24
VPS34P22543 ULP2YIL031W 3105 nt1.05□□□□□ -2.24
VPS34P22543 YGR240C-AYGR240C-A 201 nt1.04□□□□□ -2.24
VPS34P22543 HUG1YML058W-A 207 nt1.04□□□□□ -2.24
VPS34P22543 BEM2YER155C 6504 nt1.04□□□□□ -2.24
VPS34P22543 EST1YLR233C 2100 nt1.03□□□□□ -2.24
VPS34P22543 tD(GUC)QtD(GUC)Q 75 nt1.02□□□□□ -2.25
VPS34P22543 YBL100W-CYBL100W-C 120 nt1.02□□□□□ -2.25
VPS34P22543 snR47snR47 99 nt1.01□□□□□ -2.25
VPS34P22543 ORC3YLL004W 1851 nt1.01□□□□□ -2.25
VPS34P22543 CSE1YGL238W 2883 nt1□□□□□ -2.25
VPS34P22543 snR69snR69 101 nt0.99□□□□□ -2.25
VPS34P22543 YLL006W-AYLL006W-A 177 nt0.98□□□□□ -2.25
VPS34P22543 YPL060C-AYPL060C-A 3315 nt0.97□□□□□ -2.25
VPS34P22543 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
VPS34P22543 NIP1YMR309C 2439 nt0.94□□□□□ -2.26
VPS34P22543 YLR299C-AYLR299C-A 93 nt0.94□□□□□ -2.26
VPS34P22543 YDL159C-BYDL159C-B 177 nt0.93□□□□□ -2.26
VPS34P22543 SCC2YDR180W 4482 nt0.93□□□□□ -2.26
VPS34P22543 RDS3YPR094W 324 nt0.91□□□□□ -2.26
VPS34P22543 YOR192C-BYOR192C-B 5313 nt0.91□□□□□ -2.26
VPS34P22543 YNL054W-BYNL054W-B 5250 nt0.9□□□□□ -2.26
VPS34P22543 BUL2YML111W 2763 nt0.9□□□□□ -2.27
VPS34P22543 PAU12YGR294W 363 nt0.89□□□□□ -2.27
VPS34P22543 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
VPS34P22543 PAU24YBR301W 363 nt0.88□□□□□ -2.27
VPS34P22543 YML054C-AYML054C-A 159 nt0.86□□□□□ -2.27
VPS34P22543 snR64snR64 101 nt0.83□□□□□ -2.28
VPS34P22543 YJL077W-AYJL077W-A 87 nt0.83□□□□□ -2.28
VPS34P22543 tQ(UUG)QtQ(UUG)Q 76 nt0.81□□□□□ -2.28
VPS34P22543 snR53snR53 91 nt0.81□□□□□ -2.28
VPS34P22543 YHR180C-BYHR180C-B 105 nt0.8□□□□□ -2.28
VPS34P22543 YBR109W-AYBR109W-A 225 nt0.8□□□□□ -2.28
VPS34P22543 YKL225WYKL225W 348 nt0.79□□□□□ -2.28
VPS34P22543 YDR371C-AYDR371C-A 105 nt0.78□□□□□ -2.28
VPS34P22543 LTE1YAL024C 4308 nt0.76□□□□□ -2.29
VPS34P22543 RPL41AYDL184C 78 nt0.75□□□□□ -2.29
VPS34P22543 snR38snR38 95 nt0.75□□□□□ -2.29
VPS34P22543 snR50snR50 90 nt0.75□□□□□ -2.29
VPS34P22543 PET111YMR257C 2403 nt0.74□□□□□ -2.29
VPS34P22543 YER090C-AYER090C-A 90 nt0.72□□□□□ -2.29
VPS34P22543 tT(AGU)BtT(AGU)B 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)CtT(AGU)C 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)DtT(AGU)D 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)HtT(AGU)H 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)I1tT(AGU)I1 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)I2tT(AGU)I2 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)JtT(AGU)J 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)N1tT(AGU)N1 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)N2tT(AGU)N2 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)O1tT(AGU)O1 73 nt0.71□□□□□ -2.3
VPS34P22543 tT(AGU)O2tT(AGU)O2 73 nt0.71□□□□□ -2.3
VPS34P22543 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
VPS34P22543 YBR296C-AYBR296C-A 120 nt0.71□□□□□ -2.3
VPS34P22543 AI1Q0050 2505 nt0.69□□□□□ -2.3
VPS34P22543 YMR160WYMR160W 2451 nt0.67□□□□□ -2.3
VPS34P22543 tF(GAA)BtF(GAA)B 73 nt0.66□□□□□ -2.3
VPS34P22543 tF(GAA)FtF(GAA)F 73 nt0.66□□□□□ -2.3
VPS34P22543 tF(GAA)GtF(GAA)G 73 nt0.66□□□□□ -2.3
VPS34P22543 tF(GAA)H1tF(GAA)H1 73 nt0.66□□□□□ -2.3
VPS34P22543 tF(GAA)H2tF(GAA)H2 73 nt0.66□□□□□ -2.3
VPS34P22543 tF(GAA)MtF(GAA)M 73 nt0.66□□□□□ -2.3
VPS34P22543 tF(GAA)P1tF(GAA)P1 73 nt0.66□□□□□ -2.3
VPS34P22543 tF(GAA)P2tF(GAA)P2 73 nt0.66□□□□□ -2.3
VPS34P22543 YBL100W-BYBL100W-B 5313 nt0.65□□□□□ -2.31
VPS34P22543 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
VPS34P22543 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
VPS34P22543 UTP20YBL004W 7482 nt0.64□□□□□ -2.31
VPS34P22543 YDL159W-AYDL159W-A 132 nt0.63□□□□□ -2.31
VPS34P22543 snR67snR67 82 nt0.58□□□□□ -2.32
VPS34P22543 SKI7YOR076C 2244 nt0.56□□□□□ -2.32
VPS34P22543 MLP2YIL149C 5040 nt0.54□□□□□ -2.32
VPS34P22543 YKL145W-AYKL145W-A 93 nt0.53□□□□□ -2.32
VPS34P22543 MLP1YKR095W 5628 nt0.53□□□□□ -2.33
VPS34P22543 FMP27YLR454W 7887 nt0.51□□□□□ -2.33
VPS34P22543 YGR122C-AYGR122C-A 129 nt0.51□□□□□ -2.33
VPS34P22543 IQG1YPL242C 4488 nt0.5□□□□□ -2.33
VPS34P22543 YLR149C-AYLR149C-A 87 nt0.5□□□□□ -2.33
VPS34P22543 YOL014WYOL014W 375 nt0.5□□□□□ -2.33
VPS34P22543 THO2YNL139C 4794 nt0.46□□□□□ -2.34
VPS34P22543 YOR186C-AYOR186C-A 210 nt0.45□□□□□ -2.34
VPS34P22543 YML100W-AYML100W-A 174 nt0.41□□□□□ -2.34
VPS34P22543 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
VPS34P22543 YKL096C-BYKL096C-B 150 nt0.35□□□□□ -2.35
VPS34P22543 YKL106C-AYKL106C-A 120 nt0.35□□□□□ -2.35
VPS34P22543 ESP1YGR098C 4893 nt0.34□□□□□ -2.36
VPS34P22543 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
VPS34P22543 snR128snR128 126 nt0.26□□□□□ -2.37
VPS34P22543 YOR376W-AYOR376W-A 156 nt0.25□□□□□ -2.37
VPS34P22543 YDL114W-AYDL114W-A 114 nt0.23□□□□□ -2.37
VPS34P22543 PAU9YBL108C-A 129 nt0.2□□□□□ -2.38
VPS34P22543 YER078W-AYER078W-A 165 nt0.19□□□□□ -2.38
VPS34P22543 tV(UAC)QtV(UAC)Q 76 nt0.19□□□□□ -2.38
VPS34P22543 snR75snR75 89 nt0.17□□□□□ -2.38
VPS34P22543 YOR316C-AYOR316C-A 210 nt0.12□□□□□ -2.39
VPS34P22543 snR77snR77 88 nt0.07□□□□□ -2.4
VPS34P22543 tA(UGC)QtA(UGC)Q 76 nt0.06□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms