Protein–RNA interactions for Protein: P05318

RPP1A, 60S acidic ribosomal protein P1-alpha, yeastyeast

Predicted RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPP1AP05318 BUL2YML111W 2763 nt1.46□□□□□ -2.18
RPP1AP05318 NUP192YJL039C 5052 nt1.45□□□□□ -2.18
RPP1AP05318 YER078W-AYER078W-A 165 nt1.45□□□□□ -2.18
RPP1AP05318 YGR130CYGR130C 2451 nt1.45□□□□□ -2.18
RPP1AP05318 FYV8YGR196C 2454 nt1.44□□□□□ -2.18
RPP1AP05318 FAB1YFR019W 6837 nt1.42□□□□□ -2.18
RPP1AP05318 SIP4YJL089W 2490 nt1.41□□□□□ -2.18
RPP1AP05318 SKI7YOR076C 2244 nt1.4□□□□□ -2.18
RPP1AP05318 SPC110YDR356W 2835 nt1.39□□□□□ -2.19
RPP1AP05318 CLU1YMR012W 3834 nt1.39□□□□□ -2.19
RPP1AP05318 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
RPP1AP05318 YGR122C-AYGR122C-A 129 nt1.38□□□□□ -2.19
RPP1AP05318 IRA1YBR140C 9279 nt1.37□□□□□ -2.19
RPP1AP05318 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
RPP1AP05318 YOR192C-BYOR192C-B 5313 nt1.37□□□□□ -2.19
RPP1AP05318 tQ(UUG)QtQ(UUG)Q 76 nt1.36□□□□□ -2.19
RPP1AP05318 snR75snR75 89 nt1.35□□□□□ -2.19
RPP1AP05318 YJL077W-AYJL077W-A 87 nt1.34□□□□□ -2.19
RPP1AP05318 MEC1YBR136W 7107 nt1.33□□□□□ -2.2
RPP1AP05318 BRR2YER172C 6492 nt1.33□□□□□ -2.2
RPP1AP05318 YJR029WYJR029W 5268 nt1.31□□□□□ -2.2
RPP1AP05318 YPR137C-BYPR137C-B 5268 nt1.31□□□□□ -2.2
RPP1AP05318 YER090C-AYER090C-A 90 nt1.29□□□□□ -2.2
RPP1AP05318 YPR117WYPR117W 7470 nt1.25□□□□□ -2.21
RPP1AP05318 CAT8YMR280C 4302 nt1.21□□□□□ -2.21
RPP1AP05318 PET111YMR257C 2403 nt1.2□□□□□ -2.22
RPP1AP05318 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
RPP1AP05318 YGL063C-AYGL063C-A 150 nt1.19□□□□□ -2.22
RPP1AP05318 tC(GCA)BtC(GCA)B 72 nt1.11□□□□□ -2.23
RPP1AP05318 tC(GCA)GtC(GCA)G 72 nt1.11□□□□□ -2.23
RPP1AP05318 tC(GCA)P1tC(GCA)P1 72 nt1.11□□□□□ -2.23
RPP1AP05318 tC(GCA)P2tC(GCA)P2 72 nt1.11□□□□□ -2.23
RPP1AP05318 PAU24YBR301W 363 nt1.1□□□□□ -2.23
RPP1AP05318 YMR160WYMR160W 2451 nt1.1□□□□□ -2.23
RPP1AP05318 MLP2YIL149C 5040 nt1.1□□□□□ -2.23
RPP1AP05318 LTE1YAL024C 4308 nt1.08□□□□□ -2.24
RPP1AP05318 snR67snR67 82 nt1.06□□□□□ -2.24
RPP1AP05318 YBL100W-BYBL100W-B 5313 nt1.04□□□□□ -2.24
RPP1AP05318 SCC2YDR180W 4482 nt1.02□□□□□ -2.25
RPP1AP05318 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
RPP1AP05318 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
RPP1AP05318 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
RPP1AP05318 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
RPP1AP05318 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
RPP1AP05318 tH(GUG)E1tH(GUG)E1 72 nt0.98□□□□□ -2.25
RPP1AP05318 tH(GUG)E2tH(GUG)E2 72 nt0.98□□□□□ -2.25
RPP1AP05318 tH(GUG)G1tH(GUG)G1 72 nt0.98□□□□□ -2.25
RPP1AP05318 tH(GUG)G2tH(GUG)G2 72 nt0.98□□□□□ -2.25
RPP1AP05318 tH(GUG)HtH(GUG)H 72 nt0.98□□□□□ -2.25
RPP1AP05318 tH(GUG)KtH(GUG)K 72 nt0.98□□□□□ -2.25
RPP1AP05318 tH(GUG)MtH(GUG)M 72 nt0.98□□□□□ -2.25
RPP1AP05318 THO2YNL139C 4794 nt0.95□□□□□ -2.26
RPP1AP05318 tV(UAC)QtV(UAC)Q 76 nt0.94□□□□□ -2.26
RPP1AP05318 DOP1YDR141C 5097 nt0.92□□□□□ -2.26
RPP1AP05318 YDL114W-AYDL114W-A 114 nt0.91□□□□□ -2.26
RPP1AP05318 YKL106C-AYKL106C-A 120 nt0.9□□□□□ -2.27
RPP1AP05318 IQG1YPL242C 4488 nt0.85□□□□□ -2.27
RPP1AP05318 BEM2YER155C 6504 nt0.84□□□□□ -2.27
RPP1AP05318 YML100W-AYML100W-A 174 nt0.79□□□□□ -2.28
RPP1AP05318 YOR376W-AYOR376W-A 156 nt0.79□□□□□ -2.28
RPP1AP05318 tV(UAC)BtV(UAC)B 74 nt0.78□□□□□ -2.28
RPP1AP05318 tV(UAC)DtV(UAC)D 74 nt0.78□□□□□ -2.28
RPP1AP05318 UTP10YJL109C 5310 nt0.74□□□□□ -2.29
RPP1AP05318 YOL019W-AYOL019W-A 153 nt0.72□□□□□ -2.29
RPP1AP05318 SOV1YMR066W 2697 nt0.7□□□□□ -2.3
RPP1AP05318 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
RPP1AP05318 IML1YJR138W 4755 nt0.63□□□□□ -2.31
RPP1AP05318 YOR186C-AYOR186C-A 210 nt0.62□□□□□ -2.31
RPP1AP05318 snR77snR77 88 nt0.6□□□□□ -2.31
RPP1AP05318 YOR316C-AYOR316C-A 210 nt0.6□□□□□ -2.31
RPP1AP05318 MLP1YKR095W 5628 nt0.6□□□□□ -2.31
RPP1AP05318 ESP1YGR098C 4893 nt0.59□□□□□ -2.31
RPP1AP05318 YPR159C-AYPR159C-A 102 nt0.59□□□□□ -2.31
RPP1AP05318 snR40snR40 97 nt0.57□□□□□ -2.32
RPP1AP05318 FMP27YLR454W 7887 nt0.48□□□□□ -2.33
RPP1AP05318 SBH2YER019C-A 267 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)BtT(AGU)B 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)CtT(AGU)C 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)DtT(AGU)D 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)HtT(AGU)H 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)I1tT(AGU)I1 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)I2tT(AGU)I2 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)JtT(AGU)J 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)N1tT(AGU)N1 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)N2tT(AGU)N2 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)O1tT(AGU)O1 73 nt0.47□□□□□ -2.33
RPP1AP05318 tT(AGU)O2tT(AGU)O2 73 nt0.47□□□□□ -2.33
RPP1AP05318 snR128snR128 126 nt0.4□□□□□ -2.35
RPP1AP05318 PAU9YBL108C-A 129 nt0.39□□□□□ -2.35
RPP1AP05318 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
RPP1AP05318 tA(UGC)QtA(UGC)Q 76 nt0.25□□□□□ -2.37
RPP1AP05318 UTP20YBL004W 7482 nt0.13□□□□□ -2.39
RPP1AP05318 snR161snR161 161 nt0.13□□□□□ -2.39
RPP1AP05318 YJL113WYJL113W 4647 nt0.08□□□□□ -2.4
RPP1AP05318 snR6snR6 112 nt0.06□□□□□ -2.4
RPP1AP05318 YOR335W-AYOR335W-A 81 nt0.05□□□□□ -2.4
RPP1AP05318 YKL145W-AYKL145W-A 93 nt-0.07□□□□□ -2.42
RPP1AP05318 snR73snR73 106 nt-0.18□□□□□ -2.44
RPP1AP05318 RPL41BYDL133C-A 78 nt-0.2□□□□□ -2.44
RPP1AP05318 CDC65tQ(CUG)M 72 nt-0.21□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 51.5 ms