Protein–RNA interactions for Protein: P02309

HHF1, Histone H4, yeastyeast

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HHF1P02309 IML1YJR138W 4755 nt0.38□□□□□ -2.35
HHF1P02309 snR69snR69 101 nt0.37□□□□□ -2.35
HHF1P02309 YNL266WYNL266W 420 nt0.37□□□□□ -2.35
HHF1P02309 ANS1YHR126C 480 nt0.35□□□□□ -2.35
HHF1P02309 SEC10YLR166C 2616 nt0.35□□□□□ -2.35
HHF1P02309 YBR178WYBR178W 375 nt0.34□□□□□ -2.36
HHF1P02309 MLP1YKR095W 5628 nt0.33□□□□□ -2.36
HHF1P02309 STF2YGR008C 255 nt0.31□□□□□ -2.36
HHF1P02309 tD(GUC)QtD(GUC)Q 75 nt0.3□□□□□ -2.36
HHF1P02309 Q0143Q0143 153 nt0.29□□□□□ -2.36
HHF1P02309 SOV1YMR066W 2697 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)BtT(AGU)B 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)CtT(AGU)C 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)DtT(AGU)D 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)HtT(AGU)H 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)I1tT(AGU)I1 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)I2tT(AGU)I2 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)JtT(AGU)J 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)N1tT(AGU)N1 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)N2tT(AGU)N2 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)O1tT(AGU)O1 73 nt0.28□□□□□ -2.36
HHF1P02309 tT(AGU)O2tT(AGU)O2 73 nt0.28□□□□□ -2.36
HHF1P02309 YNL103W-AYNL103W-A 90 nt0.28□□□□□ -2.36
HHF1P02309 YMR160WYMR160W 2451 nt0.27□□□□□ -2.37
HHF1P02309 RDS3YPR094W 324 nt0.27□□□□□ -2.37
HHF1P02309 YJL077W-AYJL077W-A 87 nt0.26□□□□□ -2.37
HHF1P02309 YBR196C-AYBR196C-A 150 nt0.25□□□□□ -2.37
HHF1P02309 tQ(UUG)QtQ(UUG)Q 76 nt0.24□□□□□ -2.37
HHF1P02309 MLP2YIL149C 5040 nt0.24□□□□□ -2.37
HHF1P02309 YLR286W-AYLR286W-A 135 nt0.23□□□□□ -2.37
HHF1P02309 YOR186C-AYOR186C-A 210 nt0.23□□□□□ -2.37
HHF1P02309 UTP20YBL004W 7482 nt0.22□□□□□ -2.37
HHF1P02309 YIL142C-AYIL142C-A 333 nt0.22□□□□□ -2.37
HHF1P02309 THO2YNL139C 4794 nt0.21□□□□□ -2.38
HHF1P02309 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
HHF1P02309 YDL159C-BYDL159C-B 177 nt0.19□□□□□ -2.38
HHF1P02309 snR50snR50 90 nt0.19□□□□□ -2.38
HHF1P02309 snR85snR85 171 nt0.17□□□□□ -2.38
HHF1P02309 YER090C-AYER090C-A 90 nt0.17□□□□□ -2.38
HHF1P02309 snR61snR61 90 nt0.16□□□□□ -2.38
HHF1P02309 snR81snR81 201 nt0.16□□□□□ -2.38
HHF1P02309 YLR299C-AYLR299C-A 93 nt0.15□□□□□ -2.39
HHF1P02309 YBL071C-BYBL071C-B 99 nt0.15□□□□□ -2.39
HHF1P02309 YOL083C-AYOL083C-A 141 nt0.15□□□□□ -2.39
HHF1P02309 FMP27YLR454W 7887 nt0.15□□□□□ -2.39
HHF1P02309 YGL041C-BYGL041C-B 183 nt0.14□□□□□ -2.39
HHF1P02309 TFB5YDR079C-A 219 nt0.12□□□□□ -2.39
HHF1P02309 YAL037C-AYAL037C-A 93 nt0.11□□□□□ -2.39
HHF1P02309 AI1Q0050 2505 nt0.07□□□□□ -2.4
HHF1P02309 snR128snR128 126 nt0.07□□□□□ -2.4
HHF1P02309 YML054C-AYML054C-A 159 nt0.05□□□□□ -2.4
HHF1P02309 YML100W-AYML100W-A 174 nt0.05□□□□□ -2.4
HHF1P02309 YOL164W-AYOL164W-A 183 nt0.04□□□□□ -2.4
HHF1P02309 YBL109WYBL109W 336 nt0.02□□□□□ -2.41
HHF1P02309 YKL145W-AYKL145W-A 93 nt0□□□□□ -2.41
HHF1P02309 snR67snR67 82 nt-0.02□□□□□ -2.41
HHF1P02309 YMR326CYMR326C 309 nt-0.03□□□□□ -2.41
HHF1P02309 YHR180C-BYHR180C-B 105 nt-0.04□□□□□ -2.42
HHF1P02309 tS(GCU)Q1tS(GCU)Q1 86 nt-0.05□□□□□ -2.42
HHF1P02309 snR47snR47 99 nt-0.06□□□□□ -2.42
HHF1P02309 SKI7YOR076C 2244 nt-0.07□□□□□ -2.42
HHF1P02309 YHR217CYHR217C 462 nt-0.07□□□□□ -2.42
HHF1P02309 YGR240C-AYGR240C-A 201 nt-0.08□□□□□ -2.42
HHF1P02309 YBR109W-AYBR109W-A 225 nt-0.08□□□□□ -2.42
HHF1P02309 YDR524C-AYDR524C-A 120 nt-0.12□□□□□ -2.43
HHF1P02309 YBL100W-CYBL100W-C 120 nt-0.13□□□□□ -2.43
HHF1P02309 snR38snR38 95 nt-0.13□□□□□ -2.43
HHF1P02309 snR62snR62 100 nt-0.15□□□□□ -2.43
HHF1P02309 PAU9YBL108C-A 129 nt-0.15□□□□□ -2.43
HHF1P02309 RPL41AYDL184C 78 nt-0.17□□□□□ -2.44
HHF1P02309 YBR296C-AYBR296C-A 120 nt-0.18□□□□□ -2.44
HHF1P02309 YDR034C-AYDR034C-A 177 nt-0.19□□□□□ -2.44
HHF1P02309 tA(UGC)QtA(UGC)Q 76 nt-0.19□□□□□ -2.44
HHF1P02309 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
HHF1P02309 tF(GAA)BtF(GAA)B 73 nt-0.22□□□□□ -2.44
HHF1P02309 tF(GAA)FtF(GAA)F 73 nt-0.22□□□□□ -2.44
HHF1P02309 tF(GAA)GtF(GAA)G 73 nt-0.22□□□□□ -2.44
HHF1P02309 tF(GAA)H1tF(GAA)H1 73 nt-0.22□□□□□ -2.44
HHF1P02309 tF(GAA)H2tF(GAA)H2 73 nt-0.22□□□□□ -2.44
HHF1P02309 tF(GAA)MtF(GAA)M 73 nt-0.22□□□□□ -2.44
HHF1P02309 tF(GAA)P1tF(GAA)P1 73 nt-0.22□□□□□ -2.44
HHF1P02309 tF(GAA)P2tF(GAA)P2 73 nt-0.22□□□□□ -2.44
HHF1P02309 snR45snR45 172 nt-0.22□□□□□ -2.44
HHF1P02309 YER078W-AYER078W-A 165 nt-0.25□□□□□ -2.45
HHF1P02309 YJL113WYJL113W 4647 nt-0.28□□□□□ -2.45
HHF1P02309 YKL225WYKL225W 348 nt-0.28□□□□□ -2.45
HHF1P02309 YLL066W-BYLL066W-B 171 nt-0.28□□□□□ -2.45
HHF1P02309 YOL014WYOL014W 375 nt-0.3□□□□□ -2.46
HHF1P02309 YOR376W-AYOR376W-A 156 nt-0.35□□□□□ -2.47
HHF1P02309 YDL247W-AYDL247W-A 75 nt-0.38□□□□□ -2.47
HHF1P02309 URB1YKL014C 5295 nt-0.38□□□□□ -2.47
HHF1P02309 YKL106C-AYKL106C-A 120 nt-0.39□□□□□ -2.47
HHF1P02309 snR64snR64 101 nt-0.44□□□□□ -2.48
HHF1P02309 snR161snR161 161 nt-0.44□□□□□ -2.48
HHF1P02309 YDL159W-AYDL159W-A 132 nt-0.47□□□□□ -2.48
HHF1P02309 YOR316C-AYOR316C-A 210 nt-0.51□□□□□ -2.49
HHF1P02309 YGR122C-AYGR122C-A 129 nt-0.6□□□□□ -2.51
HHF1P02309 YHL009W-BYHL009W-B 5409 nt-0.62□□□□□ -2.51
HHF1P02309 snR77snR77 88 nt-0.63□□□□□ -2.51
HHF1P02309 snR53snR53 91 nt-0.64□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms