Protein–RNA interactions for Protein: O13563

RPN13, 26S proteasome regulatory subunit RPN13, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN13O13563 SCC2YDR180W 4482 nt1□□□□□ -2.25
RPN13O13563 snR69snR69 101 nt1□□□□□ -2.25
RPN13O13563 tD(GUC)QtD(GUC)Q 75 nt1□□□□□ -2.25
RPN13O13563 YLL006W-AYLL006W-A 177 nt0.99□□□□□ -2.25
RPN13O13563 snR47snR47 99 nt0.98□□□□□ -2.25
RPN13O13563 YOR192C-BYOR192C-B 5313 nt0.98□□□□□ -2.25
RPN13O13563 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
RPN13O13563 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
RPN13O13563 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
RPN13O13563 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
RPN13O13563 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
RPN13O13563 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
RPN13O13563 BUL2YML111W 2763 nt0.94□□□□□ -2.26
RPN13O13563 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
RPN13O13563 HUG1YML058W-A 207 nt0.93□□□□□ -2.26
RPN13O13563 NST1YNL091W 3723 nt0.93□□□□□ -2.26
RPN13O13563 YBL100W-CYBL100W-C 120 nt0.92□□□□□ -2.26
RPN13O13563 YDL159C-BYDL159C-B 177 nt0.91□□□□□ -2.26
RPN13O13563 YLR299C-AYLR299C-A 93 nt0.91□□□□□ -2.26
RPN13O13563 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
RPN13O13563 NUP192YJL039C 5052 nt0.89□□□□□ -2.27
RPN13O13563 PAU12YGR294W 363 nt0.89□□□□□ -2.27
RPN13O13563 RDS3YPR094W 324 nt0.89□□□□□ -2.27
RPN13O13563 SIP4YJL089W 2490 nt0.87□□□□□ -2.27
RPN13O13563 CLU1YMR012W 3834 nt0.86□□□□□ -2.27
RPN13O13563 YML054C-AYML054C-A 159 nt0.85□□□□□ -2.27
RPN13O13563 PAU24YBR301W 363 nt0.83□□□□□ -2.28
RPN13O13563 YDR371C-AYDR371C-A 105 nt0.82□□□□□ -2.28
RPN13O13563 LTE1YAL024C 4308 nt0.81□□□□□ -2.28
RPN13O13563 tV(UAC)BtV(UAC)B 74 nt0.8□□□□□ -2.28
RPN13O13563 tV(UAC)DtV(UAC)D 74 nt0.8□□□□□ -2.28
RPN13O13563 YBR109W-AYBR109W-A 225 nt0.8□□□□□ -2.28
RPN13O13563 tQ(UUG)QtQ(UUG)Q 76 nt0.78□□□□□ -2.28
RPN13O13563 snR38snR38 95 nt0.78□□□□□ -2.28
RPN13O13563 snR64snR64 101 nt0.77□□□□□ -2.29
RPN13O13563 YJL077W-AYJL077W-A 87 nt0.77□□□□□ -2.29
RPN13O13563 snR50snR50 90 nt0.76□□□□□ -2.29
RPN13O13563 YKL225WYKL225W 348 nt0.75□□□□□ -2.29
RPN13O13563 PET111YMR257C 2403 nt0.75□□□□□ -2.29
RPN13O13563 YHR180C-BYHR180C-B 105 nt0.74□□□□□ -2.29
RPN13O13563 snR53snR53 91 nt0.73□□□□□ -2.29
RPN13O13563 YER090C-AYER090C-A 90 nt0.71□□□□□ -2.3
RPN13O13563 RPL41AYDL184C 78 nt0.69□□□□□ -2.3
RPN13O13563 YBL100W-BYBL100W-B 5313 nt0.68□□□□□ -2.3
RPN13O13563 AI1Q0050 2505 nt0.68□□□□□ -2.3
RPN13O13563 YBR296C-AYBR296C-A 120 nt0.66□□□□□ -2.3
RPN13O13563 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
RPN13O13563 MLP2YIL149C 5040 nt0.65□□□□□ -2.31
RPN13O13563 YMR160WYMR160W 2451 nt0.64□□□□□ -2.31
RPN13O13563 YDL159W-AYDL159W-A 132 nt0.63□□□□□ -2.31
RPN13O13563 IML1YJR138W 4755 nt0.62□□□□□ -2.31
RPN13O13563 UTP10YJL109C 5310 nt0.61□□□□□ -2.31
RPN13O13563 IQG1YPL242C 4488 nt0.59□□□□□ -2.32
RPN13O13563 THO2YNL139C 4794 nt0.57□□□□□ -2.32
RPN13O13563 tT(AGU)BtT(AGU)B 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)CtT(AGU)C 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)DtT(AGU)D 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)HtT(AGU)H 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)I1tT(AGU)I1 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)I2tT(AGU)I2 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)JtT(AGU)J 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)N1tT(AGU)N1 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)N2tT(AGU)N2 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)O1tT(AGU)O1 73 nt0.55□□□□□ -2.32
RPN13O13563 tT(AGU)O2tT(AGU)O2 73 nt0.55□□□□□ -2.32
RPN13O13563 YPR159C-AYPR159C-A 102 nt0.53□□□□□ -2.32
RPN13O13563 snR67snR67 82 nt0.52□□□□□ -2.33
RPN13O13563 SKI7YOR076C 2244 nt0.49□□□□□ -2.33
RPN13O13563 YGR122C-AYGR122C-A 129 nt0.46□□□□□ -2.34
RPN13O13563 YLR149C-AYLR149C-A 87 nt0.45□□□□□ -2.34
RPN13O13563 SOV1YMR066W 2697 nt0.44□□□□□ -2.34
RPN13O13563 MLP1YKR095W 5628 nt0.42□□□□□ -2.34
RPN13O13563 YML100W-AYML100W-A 174 nt0.41□□□□□ -2.34
RPN13O13563 YOR186C-AYOR186C-A 210 nt0.41□□□□□ -2.34
RPN13O13563 ESP1YGR098C 4893 nt0.38□□□□□ -2.35
RPN13O13563 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
RPN13O13563 YKL106C-AYKL106C-A 120 nt0.29□□□□□ -2.36
RPN13O13563 YOL013W-AYOL013W-A 192 nt0.26□□□□□ -2.37
RPN13O13563 YOR376W-AYOR376W-A 156 nt0.25□□□□□ -2.37
RPN13O13563 snR128snR128 126 nt0.24□□□□□ -2.37
RPN13O13563 YKL096C-BYKL096C-B 150 nt0.23□□□□□ -2.37
RPN13O13563 tV(UAC)QtV(UAC)Q 76 nt0.18□□□□□ -2.38
RPN13O13563 UTP20YBL004W 7482 nt0.16□□□□□ -2.38
RPN13O13563 YDL114W-AYDL114W-A 114 nt0.16□□□□□ -2.38
RPN13O13563 YKL145W-AYKL145W-A 93 nt0.16□□□□□ -2.38
RPN13O13563 PAU9YBL108C-A 129 nt0.15□□□□□ -2.39
RPN13O13563 YER078W-AYER078W-A 165 nt0.08□□□□□ -2.4
RPN13O13563 YOR316C-AYOR316C-A 210 nt0.07□□□□□ -2.4
RPN13O13563 tA(UGC)QtA(UGC)Q 76 nt0.04□□□□□ -2.4
RPN13O13563 snR77snR77 88 nt0.03□□□□□ -2.4
RPN13O13563 snR75snR75 89 nt0.02□□□□□ -2.41
RPN13O13563 tF(GAA)BtF(GAA)B 73 nt0.01□□□□□ -2.41
RPN13O13563 tF(GAA)FtF(GAA)F 73 nt0.01□□□□□ -2.41
RPN13O13563 tF(GAA)GtF(GAA)G 73 nt0.01□□□□□ -2.41
RPN13O13563 tF(GAA)H1tF(GAA)H1 73 nt0.01□□□□□ -2.41
RPN13O13563 tF(GAA)H2tF(GAA)H2 73 nt0.01□□□□□ -2.41
RPN13O13563 tF(GAA)MtF(GAA)M 73 nt0.01□□□□□ -2.41
RPN13O13563 tF(GAA)P1tF(GAA)P1 73 nt0.01□□□□□ -2.41
RPN13O13563 tF(GAA)P2tF(GAA)P2 73 nt0.01□□□□□ -2.41
RPN13O13563 SBH2YER019C-A 267 nt-0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 54 ms