Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Prpf40aQ9R1C7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Prpf40aQ9R1C7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Prpf40aQ9R1C7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf40aQ9R1C7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.18■■□□□ 1.78
Prpf40aQ9R1C7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Prpf40aQ9R1C7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf40aQ9R1C7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf40aQ9R1C7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf40aQ9R1C7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf40aQ9R1C7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Prpf40aQ9R1C7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Prpf40aQ9R1C7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Prpf40aQ9R1C7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Prpf40aQ9R1C7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
Prpf40aQ9R1C7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Prpf40aQ9R1C7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Prpf40aQ9R1C7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Prpf40aQ9R1C7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Prpf40aQ9R1C7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Prpf40aQ9R1C7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.12■■□□□ 1.77
Prpf40aQ9R1C7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40aQ9R1C7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Prpf40aQ9R1C7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40aQ9R1C7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40aQ9R1C7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40aQ9R1C7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40aQ9R1C7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40aQ9R1C7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40aQ9R1C7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40aQ9R1C7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40aQ9R1C7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Prpf40aQ9R1C7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.08■■□□□ 1.77
Prpf40aQ9R1C7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Prpf40aQ9R1C7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Prpf40aQ9R1C7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Prpf40aQ9R1C7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Prpf40aQ9R1C7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Prpf40aQ9R1C7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Prpf40aQ9R1C7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Prpf40aQ9R1C7 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.05■■□□□ 1.76
Prpf40aQ9R1C7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Prpf40aQ9R1C7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Prpf40aQ9R1C7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf40aQ9R1C7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf40aQ9R1C7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40aQ9R1C7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Prpf40aQ9R1C7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40aQ9R1C7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40aQ9R1C7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40aQ9R1C7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Prpf40aQ9R1C7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Prpf40aQ9R1C7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Prpf40aQ9R1C7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.99■■□□□ 1.75
Prpf40aQ9R1C7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Prpf40aQ9R1C7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Prpf40aQ9R1C7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Prpf40aQ9R1C7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Prpf40aQ9R1C7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.96■■□□□ 1.75
Prpf40aQ9R1C7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Prpf40aQ9R1C7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Prpf40aQ9R1C7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Prpf40aQ9R1C7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Prpf40aQ9R1C7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Prpf40aQ9R1C7 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.93■■□□□ 1.74
Prpf40aQ9R1C7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Prpf40aQ9R1C7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
Prpf40aQ9R1C7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Prpf40aQ9R1C7 Nkain2-201ENSMUST00000092602 558 ntBASIC25.91■■□□□ 1.74
Prpf40aQ9R1C7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.9■■□□□ 1.74
Prpf40aQ9R1C7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Prpf40aQ9R1C7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.89■■□□□ 1.73
Prpf40aQ9R1C7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prpf40aQ9R1C7 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.88■■□□□ 1.73
Prpf40aQ9R1C7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Prpf40aQ9R1C7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf40aQ9R1C7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf40aQ9R1C7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf40aQ9R1C7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf40aQ9R1C7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.86■■□□□ 1.73
Prpf40aQ9R1C7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Prpf40aQ9R1C7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Prpf40aQ9R1C7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Prpf40aQ9R1C7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Prpf40aQ9R1C7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.83■■□□□ 1.73
Prpf40aQ9R1C7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.83■■□□□ 1.73
Prpf40aQ9R1C7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prpf40aQ9R1C7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.82■■□□□ 1.72
Prpf40aQ9R1C7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Prpf40aQ9R1C7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf40aQ9R1C7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Prpf40aQ9R1C7 Gm6821-201ENSMUST00000107540 542 ntBASIC25.81■■□□□ 1.72
Prpf40aQ9R1C7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Prpf40aQ9R1C7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Prpf40aQ9R1C7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Prpf40aQ9R1C7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40aQ9R1C7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40aQ9R1C7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf40aQ9R1C7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.79■■□□□ 1.72
Prpf40aQ9R1C7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms