Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rbfox1Q9JJ43 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbfox1Q9JJ43 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbfox1Q9JJ43 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rbfox1Q9JJ43 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rbfox1Q9JJ43 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbfox1Q9JJ43 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Rbfox1Q9JJ43 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbfox1Q9JJ43 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbfox1Q9JJ43 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rbfox1Q9JJ43 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rbfox1Q9JJ43 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.26■□□□□ 0.83
Rbfox1Q9JJ43 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rbfox1Q9JJ43 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbfox1Q9JJ43 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbfox1Q9JJ43 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.25■□□□□ 0.83
Rbfox1Q9JJ43 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rbfox1Q9JJ43 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbfox1Q9JJ43 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rbfox1Q9JJ43 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbfox1Q9JJ43 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbfox1Q9JJ43 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbfox1Q9JJ43 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbfox1Q9JJ43 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rbfox1Q9JJ43 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbfox1Q9JJ43 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rbfox1Q9JJ43 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.22■□□□□ 0.83
Rbfox1Q9JJ43 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.22■□□□□ 0.83
Rbfox1Q9JJ43 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.22■□□□□ 0.83
Rbfox1Q9JJ43 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbfox1Q9JJ43 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbfox1Q9JJ43 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbfox1Q9JJ43 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbfox1Q9JJ43 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rbfox1Q9JJ43 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.21■□□□□ 0.83
Rbfox1Q9JJ43 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Rbfox1Q9JJ43 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rbfox1Q9JJ43 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.2■□□□□ 0.82
Rbfox1Q9JJ43 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rbfox1Q9JJ43 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbfox1Q9JJ43 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbfox1Q9JJ43 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbfox1Q9JJ43 Zfp131-205ENSMUST00000223812 663 ntBASIC20.19■□□□□ 0.82
Rbfox1Q9JJ43 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rbfox1Q9JJ43 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbfox1Q9JJ43 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rbfox1Q9JJ43 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rbfox1Q9JJ43 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rbfox1Q9JJ43 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.18■□□□□ 0.82
Rbfox1Q9JJ43 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rbfox1Q9JJ43 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.18■□□□□ 0.82
Rbfox1Q9JJ43 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbfox1Q9JJ43 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbfox1Q9JJ43 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.17■□□□□ 0.82
Rbfox1Q9JJ43 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbfox1Q9JJ43 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rbfox1Q9JJ43 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rbfox1Q9JJ43 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rbfox1Q9JJ43 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rbfox1Q9JJ43 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rbfox1Q9JJ43 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rbfox1Q9JJ43 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rbfox1Q9JJ43 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.15■□□□□ 0.82
Rbfox1Q9JJ43 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rbfox1Q9JJ43 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.13■□□□□ 0.81
Rbfox1Q9JJ43 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rbfox1Q9JJ43 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbfox1Q9JJ43 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rbfox1Q9JJ43 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.12■□□□□ 0.81
Rbfox1Q9JJ43 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbfox1Q9JJ43 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
Rbfox1Q9JJ43 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rbfox1Q9JJ43 Gm24970-201ENSMUST00000175582 82 ntBASIC20.1■□□□□ 0.81
Rbfox1Q9JJ43 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rbfox1Q9JJ43 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Rbfox1Q9JJ43 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rbfox1Q9JJ43 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rbfox1Q9JJ43 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Rbfox1Q9JJ43 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rbfox1Q9JJ43 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rbfox1Q9JJ43 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rbfox1Q9JJ43 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rbfox1Q9JJ43 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rbfox1Q9JJ43 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rbfox1Q9JJ43 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.06■□□□□ 0.8
Rbfox1Q9JJ43 Gm9397-201ENSMUST00000200125 605 ntBASIC20.06■□□□□ 0.8
Rbfox1Q9JJ43 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rbfox1Q9JJ43 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbfox1Q9JJ43 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rbfox1Q9JJ43 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.05■□□□□ 0.8
Rbfox1Q9JJ43 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbfox1Q9JJ43 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.05■□□□□ 0.8
Rbfox1Q9JJ43 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbfox1Q9JJ43 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.04■□□□□ 0.8
Rbfox1Q9JJ43 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbfox1Q9JJ43 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbfox1Q9JJ43 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rbfox1Q9JJ43 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rbfox1Q9JJ43 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.02■□□□□ 0.8
Rbfox1Q9JJ43 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms