Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssmem1Q9D9Y8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.73■□□□□ 0.91
Ssmem1Q9D9Y8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssmem1Q9D9Y8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Ssmem1Q9D9Y8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssmem1Q9D9Y8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ssmem1Q9D9Y8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.71■□□□□ 0.91
Ssmem1Q9D9Y8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssmem1Q9D9Y8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssmem1Q9D9Y8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssmem1Q9D9Y8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssmem1Q9D9Y8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssmem1Q9D9Y8 Gm30023-201ENSMUST00000197970 889 ntBASIC20.68■□□□□ 0.9
Ssmem1Q9D9Y8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssmem1Q9D9Y8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Ssmem1Q9D9Y8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.67■□□□□ 0.9
Ssmem1Q9D9Y8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssmem1Q9D9Y8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.66■□□□□ 0.9
Ssmem1Q9D9Y8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssmem1Q9D9Y8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssmem1Q9D9Y8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssmem1Q9D9Y8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssmem1Q9D9Y8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssmem1Q9D9Y8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssmem1Q9D9Y8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ssmem1Q9D9Y8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.63■□□□□ 0.89
Ssmem1Q9D9Y8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssmem1Q9D9Y8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.62■□□□□ 0.89
Ssmem1Q9D9Y8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ssmem1Q9D9Y8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssmem1Q9D9Y8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssmem1Q9D9Y8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssmem1Q9D9Y8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssmem1Q9D9Y8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssmem1Q9D9Y8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssmem1Q9D9Y8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssmem1Q9D9Y8 Amer2-203ENSMUST00000225247 2662 ntBASIC20.6■□□□□ 0.89
Ssmem1Q9D9Y8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ssmem1Q9D9Y8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ssmem1Q9D9Y8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssmem1Q9D9Y8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.57■□□□□ 0.88
Ssmem1Q9D9Y8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssmem1Q9D9Y8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ssmem1Q9D9Y8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ssmem1Q9D9Y8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.56■□□□□ 0.88
Ssmem1Q9D9Y8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ssmem1Q9D9Y8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ssmem1Q9D9Y8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssmem1Q9D9Y8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.56■□□□□ 0.88
Ssmem1Q9D9Y8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssmem1Q9D9Y8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ssmem1Q9D9Y8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ssmem1Q9D9Y8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.54■□□□□ 0.88
Ssmem1Q9D9Y8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ssmem1Q9D9Y8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ssmem1Q9D9Y8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.53■□□□□ 0.88
Ssmem1Q9D9Y8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ssmem1Q9D9Y8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssmem1Q9D9Y8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssmem1Q9D9Y8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ssmem1Q9D9Y8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssmem1Q9D9Y8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssmem1Q9D9Y8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssmem1Q9D9Y8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssmem1Q9D9Y8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.5■□□□□ 0.87
Ssmem1Q9D9Y8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssmem1Q9D9Y8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ssmem1Q9D9Y8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssmem1Q9D9Y8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssmem1Q9D9Y8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssmem1Q9D9Y8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssmem1Q9D9Y8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssmem1Q9D9Y8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssmem1Q9D9Y8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssmem1Q9D9Y8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.48■□□□□ 0.87
Ssmem1Q9D9Y8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ssmem1Q9D9Y8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Ssmem1Q9D9Y8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ssmem1Q9D9Y8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ssmem1Q9D9Y8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ssmem1Q9D9Y8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssmem1Q9D9Y8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssmem1Q9D9Y8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssmem1Q9D9Y8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssmem1Q9D9Y8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssmem1Q9D9Y8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Ssmem1Q9D9Y8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.44■□□□□ 0.86
Ssmem1Q9D9Y8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.43■□□□□ 0.86
Ssmem1Q9D9Y8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssmem1Q9D9Y8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssmem1Q9D9Y8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
Ssmem1Q9D9Y8 Particl-201ENSMUST00000205370 1560 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms